HelloWorldLTY / scELMoLinks
Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis
☆13Updated 7 months ago
Alternatives and similar repositories for scELMo
Users that are interested in scELMo are comparing it to the libraries listed below
Sorting:
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆71Updated last month
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆22Updated 9 months ago
- Create cell sentences from sequencing data☆22Updated 11 months ago
- ☆16Updated 2 months ago
- ☆59Updated 10 months ago
- ☆55Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- Modeling complex perturbations with CellFlow☆68Updated this week
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆26Updated 3 weeks ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆28Updated 11 months ago
- Code for evaluating single cell foundation models scBERT and scGPT☆44Updated 10 months ago
- ☆23Updated last week
- A model developed for the generation of scRNA-seq data☆66Updated 4 months ago
- ☆82Updated 2 years ago
- ☆32Updated 3 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆129Updated 4 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 9 months ago
- ☆80Updated 11 months ago
- single cell foundation model for Gene network inference and more☆90Updated 2 weeks ago
- Single-cell biological network inference using a heterogeneous graph transformer☆73Updated 4 months ago
- Implementation of Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics).☆11Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆15Updated 9 months ago
- ☆34Updated 2 months ago
- Models and datasets for perturbational single-cell omics☆153Updated 2 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆19Updated last year
- ☆18Updated 5 months ago
- ☆49Updated 4 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆54Updated 11 months ago
- ☆38Updated 2 years ago