[Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis
☆24Jan 31, 2026Updated 7 months ago
Alternatives and similar repositories for scELMo
Users that are interested in scELMo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [Nature Biomedical Engineering]This is the official code repo for the paper: spEMO: Exploring the Capacity of Foundation Models for Analy…☆22May 9, 2026Updated 4 months ago
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆31Jul 2, 2025Updated last year
- ☆23Apr 30, 2025Updated last year
- Modeling and predicting single-cell multi-gene perturbation responses with scLAMBDA☆28Mar 20, 2026Updated 5 months ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Automated ingestion and conversion of various single-cell data formats, within and across species☆16Jan 26, 2026Updated 7 months ago
- Large Language Models Can Be Contextual Privacy Protection Learners☆18Oct 28, 2024Updated last year
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆116Jun 28, 2026Updated 2 months ago
- ☆22Feb 26, 2026Updated 6 months ago
- [Nature Communications] A foundation model for drug synergy analysis☆16Nov 17, 2025Updated 10 months ago
- ☆40Apr 16, 2025Updated last year
- 🏃 The go-to single-cell Foundation Model☆162Aug 11, 2026Updated last month
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆18Feb 23, 2026Updated 6 months ago
- Gain biological insights using LLM.☆14Jan 26, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A tool for visualising kmers in 2D space.☆14Feb 23, 2025Updated last year
- PhiSpace for continuous phenotyping single-cell and spatial transcriptomics data☆17Sep 10, 2026Updated last week
- In Silico Virtual Knockout Engine for Bulk RNA-seq Cohorts☆17Apr 2, 2026Updated 5 months ago
- ☆112Sep 7, 2026Updated last week
- CellVerse: Do Large Language Models Really Understand Cell Biology?☆17May 14, 2025Updated last year
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆39Mar 1, 2026Updated 6 months ago
- An R package for fast topic inference to identify tissue architecture in multiplexed images☆18Jun 5, 2026Updated 3 months ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆37Jul 11, 2025Updated last year
- Contrastive pre-training for technology-agnostic single-cell representations beyond reconstruction☆38Sep 8, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- LLM-Driven Multi-Agent Framework for Automated scRNA-Seq Data Analysis:The LLM-driven multi-agent framework for single-cell RNA sequencin…☆18Jun 11, 2026Updated 3 months ago
- Flexible, scalable, sc molQTL analyses using generalized linear models implemented in JAX☆20Updated this week
- Ctrl-DNA: Controllable Cell-Type-Specific Regulatory DNA Design via Constrained RL☆20May 28, 2025Updated last year
- R package for transcriptomic biological age analysis