Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy
☆14Sep 17, 2022Updated 3 years ago
Alternatives and similar repositories for DeepTCR_Cancer
Users that are interested in DeepTCR_Cancer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆122Sep 16, 2025Updated 6 months ago
- Single-cell immune repertoire trajectory analysis in R☆11Aug 8, 2025Updated 7 months ago
- Mapping the Functional Landscape of TCR Repertoire☆36Oct 8, 2021Updated 4 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies☆10Mar 30, 2023Updated 2 years ago
- Scripts for analyses in the Griffin manuscript☆12Dec 14, 2022Updated 3 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆21Feb 10, 2026Updated last month
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 5 months ago
- ☆22Sep 20, 2022Updated 3 years ago
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆14Apr 5, 2025Updated 11 months ago
- ☆41Aug 18, 2020Updated 5 years ago
- TCR validated database☆47May 5, 2025Updated 10 months ago
- ☆14Oct 16, 2025Updated 5 months ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆20Mar 16, 2026Updated last week
- A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.☆22May 8, 2024Updated last year
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆95Dec 4, 2020Updated 5 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆18Jan 18, 2026Updated 2 months ago
- RA Synovial Single-cell Multimodal Cell Atlas☆20Mar 6, 2024Updated 2 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- Code for WACV 2022 paper "Generalized Clustering and Multi-Manifold Learning with Geometric Structure Preservation"☆20Dec 16, 2022Updated 3 years ago
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN),图神经网络(GNN),NLP,大数据相关的发展路书(roadmap), 并附海量源码(python,pytorch)带大家消化基本知识点,突破面试,完成从 新手到合格…☆10Feb 25, 2020Updated 6 years ago
- ☆18Apr 20, 2025Updated 11 months ago
- The modern argument parser for c++ tools☆11Updated this week
- A flexible framework for nucleosome profiling of cell-free DNA☆29Jul 27, 2023Updated 2 years ago
- [IEEE TNSRE] Mixture of Experts for EEG-Based Seizure Subtype Classification☆12Aug 20, 2024Updated last year
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Jun 19, 2025Updated 9 months ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆21Aug 28, 2025Updated 6 months ago
- ☆10Nov 18, 2022Updated 3 years ago
- Genome-Genome circle synteny☆25Dec 1, 2023Updated 2 years ago
- ☆11Jun 14, 2023Updated 2 years ago
- An Online Algorithm for Constrained Face Clustering in Videos☆12Oct 7, 2018Updated 7 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Sep 20, 2022Updated 3 years ago
- Registries for biological ontologies.☆25Updated this week
- Dynamic Simulation Environments for Reinforcement Learning☆13Apr 17, 2021Updated 4 years ago
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆20Jun 12, 2024Updated last year
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆106Dec 18, 2025Updated 3 months ago
- Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma☆21Aug 15, 2021Updated 4 years ago