vandijklab / CINEMA-OTLinks
☆33Updated 4 months ago
Alternatives and similar repositories for CINEMA-OT
Users that are interested in CINEMA-OT are comparing it to the libraries listed below
Sorting:
- ☆59Updated last year
- ☆56Updated last year
- ☆48Updated 5 months ago
- ☆37Updated 3 months ago
- ☆49Updated last month
- ACTIONet single-cell analysis framework☆42Updated 11 months ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆109Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- ☆82Updated last year
- ☆50Updated 6 months ago
- ☆46Updated last year
- ☆85Updated 2 years ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated 5 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆33Updated last month
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 10 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆102Updated 6 months ago
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆49Updated 7 months ago
- ☆26Updated last year
- Single cell omics biology annotations☆51Updated 4 months ago
- ☆54Updated 10 months ago
- ☆40Updated this week
- spatial transcriptome, single cell☆69Updated 2 years ago
- Functional and Learnable Cell dynamicS☆17Updated 4 months ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆79Updated 3 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆64Updated 2 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆19Updated last year
- ☆40Updated 2 years ago
- ☆30Updated last month
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆58Updated 5 years ago