cabooster / DeepCAD-RT
DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning
☆97Updated 2 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for DeepCAD-RT
- SRDTrans: Spatial redundancy transformer for self-supervised fluorescence image denoising☆67Updated 2 months ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆69Updated 4 months ago
- DeepCAD: Deep self-supervised learning for calcium imaging denoising☆101Updated last year
- ☆22Updated last year
- Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…☆27Updated 2 weeks ago
- Three-dimensional residual channel attention networks☆50Updated 2 years ago
- ☆10Updated last year
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆72Updated 3 years ago
- code of the registration and deconvolution project☆33Updated 3 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆60Updated 5 years ago
- Flow-Registration toolbox for 2P motion compensation☆21Updated 3 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆44Updated last year
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆27Updated 4 years ago
- Official Python implementation of the 'Sparse deconvolution'-v0.3.0☆48Updated 9 months ago
- A deeplearning network based on Richardson-Lucy formula☆41Updated last year
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆25Updated 3 weeks ago
- ☆21Updated 3 months ago
- Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3☆77Updated 9 months ago
- Combined Repos from DAIN and Zooming SlowMo☆19Updated last year
- Automatic Correction for sCMOS-related Noise☆17Updated 2 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆82Updated 3 months ago
- ☆31Updated last year
- Joint training of denoising and segmentation.☆67Updated last year
- This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise re…☆35Updated 11 months ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆142Updated 2 years ago
- Kang, I., Zhang, Q., Yu, S.X. et al. Coordinate-based neural representations for computational adaptive optics in widefield microscopy. N…☆10Updated 3 months ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆31Updated 2 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated last year
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆111Updated 3 weeks ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆64Updated this week