llerussell / Bruker_PrairieLink
Stream data from PrairieView into MATLAB to allow online processing and analysis
☆11Updated last year
Alternatives and similar repositories for Bruker_PrairieLink:
Users that are interested in Bruker_PrairieLink are comparing it to the libraries listed below
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- Match suite2p ROIs between imaging sessions☆24Updated 5 years ago
- motion correction☆16Updated 2 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆47Updated last year
- Control and design of two-photon photostimulation experiments☆16Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- pipeline for volumetric cell segmentation☆12Updated last week
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- Region Of Interest Classification and Tracking☆16Updated this week
- miniscope analysis pipeline with interactive visualizations☆93Updated 7 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆33Updated this week
- pyqt5 dependent applications for IBL sessions☆25Updated this week
- Single photon tools for Neuroscience☆35Updated last year
- ☆19Updated last year
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆11Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last week
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆13Updated last month
- ☆35Updated 3 years ago
- Histology processing☆65Updated 11 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 4 months ago
- ☆52Updated 6 months ago
- ☆34Updated last year
- Fiber photometry analysis☆22Updated 2 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated 9 months ago
- Pre-processing pipeline for widefield data☆11Updated 4 years ago
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- Open Neurophysiology Environment☆18Updated this week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 8 months ago