PYthon Neural Analysis Package
☆362Mar 21, 2026Updated this week
Alternatives and similar repositories for pynapple
Users that are interested in pynapple are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆128Updated this week
- pynapple collaborative data analysis (high level python scripts)☆39Dec 4, 2025Updated 3 months ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆747Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Apr 16, 2025Updated 11 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆75Updated this week
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆358Mar 13, 2026Updated last week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆111Mar 16, 2026Updated last week
- A Python API for working with Neurodata stored in the NWB Format☆210Updated this week
- Fast spike sorting with drift correction☆595Mar 5, 2026Updated 2 weeks ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Feb 20, 2026Updated last month
- a visualization method for neural data☆244Apr 4, 2025Updated 11 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆143Mar 3, 2026Updated 3 weeks ago
- Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA☆1,080Feb 2, 2026Updated last month
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆402Updated this week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Mar 5, 2026Updated 2 weeks ago
- A curated list of awesome Neuropixels resources.☆128Dec 16, 2025Updated 3 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆134Mar 1, 2026Updated 3 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆79Updated this week
- Tool to help inspect NWB files for compliance with NWB Best Practices☆22Updated this week
- Browser-based NWB visualization and DANDI exploration☆63Mar 16, 2026Updated last week
- Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.☆220Mar 12, 2026Updated last week
- WIP: Python port of Kilosort2☆50Jul 8, 2023Updated 2 years ago
- A python package that includes many methods for decoding neural activity☆469Jul 3, 2023Updated 2 years ago
- ☆53Aug 30, 2024Updated last year
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆52Feb 23, 2026Updated last month
- ☆13Nov 7, 2019Updated 6 years ago
- Tutorial☆11Jan 25, 2021Updated 5 years ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆74Mar 13, 2026Updated last week
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆84Mar 13, 2026Updated last week
- A Python toolbox for analysing animal body movements across space and time☆265Updated this week
- A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.☆252Jan 8, 2026Updated 2 months ago
- A Python package to visualise neuroanatomical data in atlas space☆635Mar 13, 2026Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆59Jan 1, 2026Updated 2 months ago
- ☆29Oct 22, 2025Updated 5 months ago
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆73Mar 8, 2026Updated 2 weeks ago
- Code for Functional Mixed Models for Fiber Photometry☆17Jul 30, 2025Updated 7 months ago
- Parameterizing neural power spectra into periodic & aperiodic components.☆426Mar 9, 2026Updated 2 weeks ago
- Elephant is the Electrophysiology Analysis Toolkit☆236Mar 8, 2026Updated 2 weeks ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆718Feb 19, 2026Updated last month