codeneuro / neurofinderLinks
benchmarking challenge for finding neurons in imaging data
☆74Updated 6 years ago
Alternatives and similar repositories for neurofinder
Users that are interested in neurofinder are comparing it to the libraries listed below
Sorting:
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Tools for processing 2P recordings☆130Updated 2 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated 2 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆148Updated last year
- Tools for spike data analysis and visualization☆110Updated 2 years ago
- Deconvolution of calcium imaging data☆103Updated 11 months ago
- A class for using ML algorithms for spike prediction☆61Updated 7 years ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- Neuronal Morphology Analysis Tool☆108Updated 10 months ago
- Python tools for analysis of neurophysiology data☆37Updated 2 years ago
- ☆41Updated 4 years ago
- Blazing fast calcium imaging analysis toolbox☆21Updated 8 years ago
- Preprint classes for biological journals☆31Updated 5 years ago
- Automatic spike sorting up to 64 channels☆53Updated 4 years ago
- Single photon tools for Neuroscience☆36Updated 2 months ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆33Updated 5 years ago
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 9 years ago
- dataset info for the neurofinder challenge☆12Updated 9 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆24Updated 8 months ago
- MATLAB analysis functions for Miniscope project.☆19Updated 8 years ago
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Adaptive Platform for Neuroscience Experiments☆42Updated last month
- Database for experimental neuroscience laboratories☆50Updated last week
- An algorithm for unsupervised discovery of sequential structure☆169Updated last year
- Python package for analysis of dynamic fluorescence microscopy data☆103Updated 6 years ago