codeneuro / neurofinderLinks
benchmarking challenge for finding neurons in imaging data
☆74Updated 6 years ago
Alternatives and similar repositories for neurofinder
Users that are interested in neurofinder are comparing it to the libraries listed below
Sorting:
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated last year
- Tools for processing 2P recordings☆127Updated last year
- Deconvolution of calcium imaging data☆98Updated 7 months ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- Python tools for analysis of neurophysiology data☆37Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Recordings of 10k neurons during spontaneous behaviors☆52Updated last year
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- YASS: Yet Another Spike Sorter☆70Updated 2 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated 4 months ago
- Neuronal Morphology Analysis Tool☆106Updated 6 months ago
- MATLAB analysis functions for Miniscope project.☆19Updated 8 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated 2 years ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Updated 7 years ago
- A class for using ML algorithms for spike prediction☆61Updated 7 years ago
- Blazing fast calcium imaging analysis toolbox☆22Updated 8 years ago
- ☆40Updated 3 years ago
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 8 years ago
- IBL core shared libraries☆63Updated this week
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- Single photon tools for Neuroscience☆35Updated last year
- Preprint classes for biological journals☆30Updated 4 years ago
- dataset info for the neurofinder challenge☆11Updated 9 years ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Automatic spike sorting up to 64 channels☆53Updated 4 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆101Updated 6 years ago
- An algorithm for unsupervised discovery of sequential structure☆166Updated last year