codeneuro / neurofinderLinks
benchmarking challenge for finding neurons in imaging data
☆75Updated 6 years ago
Alternatives and similar repositories for neurofinder
Users that are interested in neurofinder are comparing it to the libraries listed below
Sorting:
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Python tools for analysis of neurophysiology data☆37Updated 2 years ago
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- Tools for spike data analysis and visualization☆111Updated 3 years ago
- A class for using ML algorithms for spike prediction☆62Updated 7 years ago
- Deconvolution of calcium imaging data☆105Updated last year
- Neuronal Morphology Analysis Tool☆108Updated 11 months ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆152Updated last year
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 9 years ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- A toolbox for inferring spikes from calcium traces.☆23Updated 2 years ago
- Preprint classes for biological journals☆31Updated 5 years ago
- Tools for processing 2P recordings☆131Updated 2 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Blazing fast calcium imaging analysis toolbox☆21Updated 8 years ago
- YASS: Yet Another Spike Sorter☆69Updated 3 years ago
- Automatic cell detection in microscopy data using convolutional networks☆34Updated 3 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆25Updated 10 months ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆103Updated 6 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆51Updated 4 years ago
- Automatic spike sorting up to 64 channels☆54Updated 4 years ago
- [DEPRECATED] Python API for NWB < 2.0☆30Updated 8 years ago
- An algorithm for unsupervised discovery of sequential structure☆168Updated last year
- dataset info for the neurofinder challenge☆12Updated 9 years ago
- ☆41Updated 4 years ago
- Single photon tools for Neuroscience☆36Updated 3 months ago
- List of summer schools in neuroscience and related fields☆226Updated 6 years ago
- Python code for estimation of linear-nonlinear model parameters☆21Updated 4 years ago