NeuralEnsemble / elephant

Related projects ⓘ

Alternatives and complementary repositories for elephant

• MouseLand / rastermap
  a visualization method for neural data
  ☆195Updated last month
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆109Updated 3 months ago
• pynapple-org / pynapple
  PYthon Neural Analysis Package
  ☆281Updated this week
• open-ephys / analysis-tools
  Archived code for reading data saved by the Open Ephys GUI
  ☆59Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆113Updated last month
• NeuralEnsemble / python-neo
  Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…
  ☆325Updated last week
• cortex-lab / KiloSort
  GPU code for spike sorting
  ☆179Updated 9 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆49Updated 2 years ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆83Updated this week
• jonescompneurolab / hnn
  The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on ci…
  ☆81Updated 5 months ago
• tridesclous / tridesclous
  offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.
  ☆52Updated last year
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆82Updated this week
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆60Updated last year
• cortex-lab / neuropixels
  Information about Neuropixels electrode arrays
  ☆83Updated last year
• suny-downstate-medical-center / netpyne
  A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks…
  ☆149Updated last week
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆119Updated 11 months ago
• LFPy / LFPy
  Python-module for calculation of extracellular potentials from multicompartment neuron models and networks
  ☆76Updated 9 months ago
• pyrates-neuroscience / PyRates
  Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…
  ☆74Updated 3 months ago
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆22Updated last month
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆96Updated 3 weeks ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆51Updated this week
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆74Updated 9 months ago
• fooof-tools / fooof
  Parameterizing neural power spectra into periodic & aperiodic components.
  ☆363Updated last month
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆77Updated this week
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆61Updated this week
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆47Updated 3 weeks ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆55Updated 3 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆68Updated 4 years ago
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆65Updated 2 years ago