cortex-lab / phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
☆355Updated 9 months ago
Alternatives and similar repositories for phy
Users that are interested in phy are comparing it to the libraries listed below
Sorting:
- Fast spike sorting with drift correction☆526Updated this week
- GPU code for spike sorting☆184Updated last year
- cell detection in calcium imaging recordings☆379Updated last month
- A Python-based module for creating flexible and robust spike sorting pipelines.☆596Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆115Updated 8 months ago
- Tools to work with Allen Inst CCF data in matlab☆134Updated last year
- Elephant is the Electrophysiology Analysis Toolkit☆211Updated last month
- a visualization method for neural data☆222Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆87Updated last month
- cortex lab code for electrophysiology☆81Updated last year
- PYthon Neural Analysis Package☆310Updated last week
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Tools for processing 2P recordings☆125Updated last year
- A curated list of awesome Neuropixels resources.☆101Updated 3 months ago
- [This repository is archived, will be deprecated after the release of phy 2.0]☆30Updated 5 years ago
- Registration of cells across sessions.☆75Updated 8 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆121Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated last month
- Code for internal lab sharing - polishing has started but is by no means complete☆126Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆165Updated last month
- Fast and scalable spike sorting in python☆89Updated last year
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆337Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆140Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 2 months ago
- Python package to handle probe layout, geometry and wiring to device.☆62Updated last week
- Information about Neuropixels electrode arrays☆89Updated 5 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆100Updated 5 months ago
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated 9 months ago
- Python code implementing the ZETA-test☆26Updated last month