MouseLand / Kilosort
Fast spike sorting with drift correction for up to a thousand channels
☆456Updated this week
Related projects: ⓘ
- A Python-based module for creating flexible and robust spike sorting pipelines.☆495Updated this week
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆314Updated last month
- GPU code for spike sorting☆175Updated 7 months ago
- cell detection in calcium imaging recordings☆346Updated 3 months ago
- PYthon Neural Analysis Package☆257Updated this week
- Tools to work with Allen Inst CCF data in matlab☆122Updated 6 months ago
- a visualization method for neural data☆173Updated 2 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆106Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆79Updated this week
- Complete Matlab pipeline for large scale calcium imaging data analysis☆250Updated last year
- Tools for processing 2P recordings☆121Updated 11 months ago
- cortex lab code for electrophysiology☆72Updated 7 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆119Updated 9 months ago
- Registration of cells across sessions.☆67Updated 3 weeks ago
- Elephant is the Electrophysiology Analysis Toolkit☆195Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆154Updated last week
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆139Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆109Updated last week
- Information about Neuropixels electrode arrays☆81Updated 10 months ago
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆316Updated this week
- A curated list of awesome Neuropixels resources.☆68Updated 3 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆96Updated 2 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆50Updated last month
- Archived code for reading data saved by the Open Ephys GUI☆59Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆115Updated 3 weeks ago
- A python package that includes many methods for decoding neural activity☆420Updated last year
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆624Updated 2 weeks ago
- Parameterizing neural power spectra into periodic & aperiodic components.☆356Updated last month
- A Python API for working with Neurodata stored in the NWB Format☆176Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆65Updated this week