MorrellLAB / BAD_Mutations
Deleterious mutation prediction pipeline
☆13Updated 3 months ago
Alternatives and similar repositories for BAD_Mutations:
Users that are interested in BAD_Mutations are comparing it to the libraries listed below
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Toolkit for evolutionary analyses of linkage groups☆27Updated 8 months ago
- ☆19Updated 2 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆17Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆20Updated 8 months ago
- ☆22Updated last year
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Updated 5 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- R package to draw syntenic plots in 3 different styles☆39Updated last year
- ☆12Updated 2 years ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆28Updated 2 months ago
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆23Updated last week
- Dynamic Elongation of a Genome Assembly Path☆21Updated 10 months ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆13Updated last year
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆9Updated 2 years ago
- ☆32Updated 4 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Selection outlier scan with population branch statistic☆13Updated last year
- Sex assignment through coverage☆17Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆33Updated last month
- General purpose population genetics software☆12Updated 5 years ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated 6 months ago
- ☆20Updated 7 months ago
- K-mer based classifier for Y-contig identification from Whole Genome Assemblies☆11Updated 5 years ago
- Domain based annotation of transposable elements☆19Updated last month