MorrellLAB / BAD_Mutations
Deleterious mutation prediction pipeline
☆13Updated 4 months ago
Alternatives and similar repositories for BAD_Mutations:
Users that are interested in BAD_Mutations are comparing it to the libraries listed below
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- Automated pipeline for running CoalHMM☆13Updated last year
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆18Updated 5 years ago
- R package to draw syntenic plots in 3 different styles☆40Updated last year
- Likelihood-based Selective Sweep Detection☆37Updated last year
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆17Updated 2 years ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- ☆19Updated 2 years ago
- Software package for estimating fine-scale recombination rate.☆14Updated 3 years ago
- Toolkit for evolutionary analyses of linkage groups☆31Updated 9 months ago
- Selection outlier scan with population branch statistic☆13Updated last year
- ☆23Updated last year
- Analyses of sex chromosome evolution in songbirds☆16Updated 5 years ago
- Gene model transfer from closely related reference genomes using cDNA alignments☆10Updated 4 years ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆26Updated 2 years ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 5 months ago
- ☆12Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- Robust identification of orthologous Synteny with the Orthology Index☆18Updated last week
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆30Updated 3 months ago
- ☆27Updated last month
- Sex assignment through coverage☆17Updated last year
- ☆12Updated 5 years ago
- ☆40Updated last year
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated last year
- Domain based annotation of transposable elements☆19Updated last week
- Fast and frugal disk based k-mer counter☆14Updated 4 years ago