therkildsen-lab / lcwgs-simulationLinks
☆16Updated 3 years ago
Alternatives and similar repositories for lcwgs-simulation
Users that are interested in lcwgs-simulation are comparing it to the libraries listed below
Sorting:
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Scripts and resources for the haploblocks manuscript☆16Updated 5 years ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- Pooled Sequencing Analysis for Sex Signal☆11Updated 3 years ago
- ☆12Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- ☆24Updated 8 years ago
- Scripts to handle NGS data and other biological data☆21Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 10 months ago
- Scripts that used in our chicken T2T manuscript.☆20Updated 2 years ago
- Some codes about evolutionary history of wheats☆8Updated last year
- ☆43Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆42Updated 2 months ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆17Updated last month
- ☆12Updated 2 years ago
- ☆50Updated last month
- Predicts adaptive introgression using a CNN trained on genotype matrices.☆17Updated last year
- ☆40Updated 2 years ago
- Infer demographic history with the Moran model☆47Updated last month
- Bulked-Segregant Analysis using vcf file with or without parents☆28Updated 6 months ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 5 months ago
- ☆24Updated 2 years ago
- ☆20Updated 2 years ago
- ☆21Updated 11 months ago
- Likelihood-based Selective Sweep Detection☆39Updated last year
- issues for semina "Data Visulization"☆13Updated last month
- Centromics: visualing centromeres with multiple omics data☆23Updated 4 months ago