therkildsen-lab / lcwgs-simulation
☆16Updated 2 years ago
Alternatives and similar repositories for lcwgs-simulation:
Users that are interested in lcwgs-simulation are comparing it to the libraries listed below
- Scripts and resources for the haploblocks manuscript☆15Updated 4 years ago
- ☆12Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- Pooled Sequencing Analysis for Sex Signal☆11Updated 3 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Automated pipeline for running CoalHMM☆12Updated last year
- ☆17Updated 2 years ago
- ☆16Updated 4 months ago
- ☆24Updated 7 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆19Updated last year
- ☆12Updated last year
- Scripts of population genomics analysis☆35Updated 6 years ago
- Deleterious mutation prediction pipeline☆13Updated 2 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- scripts☆15Updated 6 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆29Updated last year
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 2 months ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆30Updated 11 months ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Population genetics analyses from NGS data☆25Updated 3 years ago
- ☆23Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆24Updated 3 weeks ago
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- Codes for the lettuce resequencing project in 2020☆28Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- ☆25Updated 3 years ago