molevol-ub / bitacoraLinks
BITACORA: A Bioinformatics tool for gene family annotation
☆51Updated last month
Alternatives and similar repositories for bitacora
Users that are interested in bitacora are comparing it to the libraries listed below
Sorting:
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆37Updated last year
- ☆45Updated 3 years ago
- ☆41Updated 2 years ago
- ☆43Updated 6 months ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Genome Annotation Pipeline☆41Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆53Updated 5 months ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆34Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 2 weeks ago
- ☆35Updated 5 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- ☆29Updated 2 weeks ago
- Multi-genome synteny block visualization tool☆52Updated 3 weeks ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated 2 months ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆25Updated 2 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 7 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 11 months ago
- DNA序列比对结果 可视化展示工具☆57Updated 3 years ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 4 years ago