xtmtd / PhylogenomicsLinks
☆16Updated last year
Alternatives and similar repositories for Phylogenomics
Users that are interested in Phylogenomics are comparing it to the libraries listed below
Sorting:
- ☆12Updated 2 years ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 7 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆34Updated 3 weeks ago
- ☆24Updated last week
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Updated last year
- ☆14Updated 3 weeks ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- ☆21Updated 2 years ago
- ☆16Updated 2 years ago
- ☆16Updated 3 years ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- ☆12Updated 2 years ago
- Decomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve o…☆10Updated 5 months ago
- MCMCtree tutorials☆26Updated last year
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 8 months ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated 2 years ago
- ☆29Updated 7 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 11 months ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- ☆21Updated last year
- ☆28Updated 3 years ago
- Visualing species tree from ASTRAL with gene tree discordance☆26Updated 6 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆17Updated last year
- ☆41Updated 2 years ago
- ☆24Updated 2 years ago