schneebergerlab / fixchrLinks
☆21Updated last year
Alternatives and similar repositories for fixchr
Users that are interested in fixchr are comparing it to the libraries listed below
Sorting:
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 7 months ago
- A tool for evaluating long-read de novo assembly results☆50Updated last year
- A genome assembly assessment pipeline.☆38Updated 2 years ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- Centromics: visualing centromeres with multiple omics data☆20Updated 2 years ago
- ☆41Updated 2 years ago
- Identification of transposable element families from pangenome polymorphisms☆55Updated 7 months ago
- a Semi-automated pipeline for assembling T2T genome☆25Updated 3 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated last year
- TSEBRA: Transcript Selector for BRAKER☆49Updated 2 months ago
- ☆33Updated 10 months ago
- ☆32Updated last year
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- Genome Annotation Pipeline☆42Updated last year
- Multi-genome synteny block visualization tool☆52Updated last week
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 11 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆50Updated last month
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆77Updated last month
- An efficient assembly tool for plant mitochondrial genome☆68Updated last year
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆33Updated last year
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- Draw a dot plot from a paf alignment☆37Updated 4 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆34Updated 2 months ago
- ☆43Updated 5 months ago
- ☆29Updated 3 weeks ago
- A organelle de novo genome assembly toolkit☆73Updated 10 months ago