Alternatives and similar repositories for clann

Users that are interested in clann are comparing it to the libraries listed below

• aewebb80 / VESPA
  VESPA: Very large-scale Evolutionary and Selective Pressure Analyses
  ☆15Updated 3 years ago
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆18Updated last year
• sanger-pathogens / gff3toembl
  Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI
  ☆29Updated 6 years ago
• simonwhelan / prequal
  PREQUAL: a pre-alignment quality filter for comparative sequence analyses
  ☆31Updated 2 years ago
• computations / root_digger
  A tool to root phylogenies
  ☆19Updated 8 months ago
• UtaDaphniaLab / Gene_Annotation_Easy_Viewer
  Tool to help visualize data after BLAST by generating pathways on KEGG using an input file of genes and their associated KEGG accession.
  ☆11Updated 3 years ago
• arzwa / Whale.jl
  Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation
  ☆15Updated 2 weeks ago
• alexcritschristoph / MicrobialGenomicsScripts
  A selection of short scripts for analyzing microbial genomes
  ☆14Updated 6 years ago
• jessiewu / bacterialGWAS
  A pipeline for performing genome-wide association tests for bacterial genomes.
  ☆27Updated 7 years ago
• atifrahman / SWALO
  Scaffolding with assembly likelihood optimization
  ☆22Updated 4 years ago
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆18Updated 4 years ago
• DessimozLab / matreex
  ☆16Updated 6 months ago
• santeripuranen / SpydrPick
  SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.
  ☆13Updated 3 years ago
• Gardner-BinfLab / deltaBS
  Quantifying the significance of genetic variation using probabilistic profile-based methods.
  ☆19Updated 4 years ago
• gengit / PosiGene
  ☆26Updated 4 years ago
• sjspielman / phyphy
  Python HyPhy: Facilitating HyPhy execution and parsing
  ☆22Updated 3 years ago
• b-brankovics / grabb
  GRAbB (Genome Region Assembly by Baiting) is a program designed to assemble selected regions of the genome or transcriptome using referen…
  ☆13Updated 4 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated last month
• johnomics / tapestry
  Validate and edit small eukaryotic genome assemblies
  ☆31Updated 2 years ago
• janepipistrelle / bacterial_GWAS_tutorial
  Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop
  ☆18Updated 9 years ago
• TheSEED / RASTtk-Distribution
  KBase distribution module for RASTtk.
  ☆13Updated 4 years ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• gamcil / clustermap.js
  ☆31Updated 3 years ago
• balabanmetin / uDance
  ☆43Updated last year
• bcthomas / pullseq
  Utility program for extracting sequences from a fasta/fastq file
  ☆36Updated 4 months ago
• AliTVTeam / AliTV-perl-interface
  ☆10Updated 3 years ago
• EBI-Metagenomics / kegg-pathways-completeness-tool
  ☆21Updated 3 months ago
• AlexanderLabWHOI / EUKulele
  Automatic eukaryotic taxonomic classification
  ☆28Updated last week
• JLSteenwyk / orthofisher
  a broadly applicable tool for automated gene identification and retrieval
  ☆31Updated 5 months ago
• duchene / phylomad
  ☆19Updated 11 months ago