ChrisCreevey / clannLinks
Clann: constructing consensus trees and supertrees from multiple source trees
☆17Updated 2 months ago
Alternatives and similar repositories for clann
Users that are interested in clann are comparing it to the libraries listed below
Sorting:
- ☆16Updated 7 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆31Updated 3 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 6 months ago
- ☆43Updated last year
- A tool to root phylogenies☆19Updated 9 months ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Updated 3 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- Convert genbank files to a swath of other formats☆18Updated last year
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 3 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 5 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated last year
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- ☆20Updated last year
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last year
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- use paired-end transcriptome reads to scaffold genomes☆11Updated 6 years ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆38Updated 4 years ago
- ☆26Updated 4 years ago
- ☆45Updated 3 years ago
- Find Unique genomic Regions☆29Updated 2 months ago
- a Contig Alignment Tool for Pairwise Assembly Comparison☆13Updated 5 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated last year
- ☆19Updated 11 months ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆38Updated 3 months ago
- ☆22Updated 2 years ago
- ☆17Updated 11 months ago
- A script for comparing old vs new versions of genome annotations☆21Updated last year
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 7 years ago