Alternatives and similar repositories for clann:

Users that are interested in clann are comparing it to the libraries listed below

• aewebb80 / VESPA
  VESPA: Very large-scale Evolutionary and Selective Pressure Analyses
  ☆14Updated 3 years ago
• computations / root_digger
  A tool to root phylogenies
  ☆19Updated 6 months ago
• UtaDaphniaLab / Gene_Annotation_Easy_Viewer
  Tool to help visualize data after BLAST by generating pathways on KEGG using an input file of genes and their associated KEGG accession.
  ☆11Updated 2 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated this week
• simonwhelan / prequal
  PREQUAL: a pre-alignment quality filter for comparative sequence analyses
  ☆31Updated 2 years ago
• svm-zhang / AGOUTI
  Annotated Genome Optimization Using Transcriptome Information
  ☆19Updated 4 years ago
• janepipistrelle / bacterial_GWAS_tutorial
  Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop
  ☆18Updated 9 years ago
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆16Updated last year
• atifrahman / SWALO
  Scaffolding with assembly likelihood optimization
  ☆21Updated 4 years ago
• Adamtaranto / blast-besties
  Rapid discovery of reciprocal best blast pairs.
  ☆10Updated 4 months ago
• JLSteenwyk / orthofisher
  a broadly applicable tool for automated gene identification and retrieval
  ☆30Updated 3 months ago
• b-brankovics / grabb
  GRAbB (Genome Region Assembly by Baiting) is a program designed to assemble selected regions of the genome or transcriptome using referen…
  ☆13Updated 4 years ago
• etabari / PorthoMCL
  Parallel implementation of OrthoMCL
  ☆21Updated 2 years ago
• balabanmetin / uDance
  ☆43Updated 11 months ago
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆18Updated 4 years ago
• fab-araujo / gofeat
  GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data
  ☆17Updated 11 months ago
• aesheppard / TETyper
  transposable element typing pipeline
  ☆17Updated last year
• broadinstitute / SynerClust
  source code for SynerClust
  ☆9Updated 5 years ago
• aweimann / traitar
  ☆22Updated last year
• eclarke / komplexity
  A method of assessing sequence complexity based on kmer frequencies
  ☆31Updated 6 years ago
• rdpstaff / Xander_assembler
  A gene-targeted assembler tool
  ☆19Updated 7 years ago
• caballero / RepeatLandscape
  profile the repeat landscape in a genome
  ☆15Updated 10 years ago
• DessimozLab / matreex
  ☆16Updated 5 months ago
• bcthomas / pullseq
  Utility program for extracting sequences from a fasta/fastq file
  ☆36Updated 3 months ago
• mpdunne / orthofiller
  OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.
  ☆22Updated 2 years ago
• DRL / kinfin
  Taxon-aware analysis of clustered protein sequences
  ☆30Updated 9 months ago
• ecbush / xenoGI
  Code for detecting genomic island insertions in clades of microbes.
  ☆19Updated last year
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆35Updated 2 months ago
• gengit / PosiGene
  ☆26Updated 4 years ago
• sjspielman / phyphy
  Python HyPhy: Facilitating HyPhy execution and parsing
  ☆21Updated 3 years ago