Alternatives and similar repositories for Ancestral_Genome_Reconstruction

Users that are interested in Ancestral_Genome_Reconstruction are comparing it to the libraries listed below

• tangerzhang / calc_switchErr
  ☆27Updated last month
• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆19Updated this week
• Argonum-Clever2 / mike
  ☆29Updated last month
• ShuaiNIEgithub / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆18Updated last year
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆17Updated last year
• cchauve / ANGeS
  Reconstruction of ancestral genome maps
  ☆16Updated 7 years ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated 2 months ago
• hsigeman / findZX
  ☆19Updated 2 years ago
• panlab-bioinfo / Gap-Aid
  ☆12Updated this week
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 9 months ago
• ShiuLab / PseudogenePipeline
  ☆40Updated last year
• rivasiker / autocoalhmm
  Automated pipeline for running CoalHMM
  ☆13Updated last year
• jkimlab / DESCHRAMBLER
  ☆23Updated last year
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 8 months ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆30Updated 3 months ago
• heche-psb / wgd
  wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
  ☆33Updated 3 months ago
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated last year
• i10labtitech / GINGER
  ☆28Updated last year
• Zhanmengtao / bin
  scripts
  ☆16Updated 6 years ago
• YingDings / Introgression-Detection-Methods
  ☆12Updated last year
• rpianezza / GenomeDelta
  Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…
  ☆17Updated 5 months ago
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• liushoucheng / SPART
  a Semi-automated pipeline for assembling T2T genome
  ☆17Updated this week
• xiekunwhy / kmerDedup
  Reduce genome assembly redundancy using shared mapped k-mer method.
  ☆14Updated 2 weeks ago
• CAFS-bioinformatics / LR_Gapcloser
  use long sequenced reads to close gaps in assemblies
  ☆37Updated 6 years ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• symgenoevolab / SyntenyFinder
  SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…
  ☆30Updated 4 months ago
• amvarani / Plant_Annotation_TEs
  Methods and recipes for Plant Genome Annotation - Transposable Elements
  ☆18Updated 2 years ago
• lardo / khaper
  ☆27Updated 2 years ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 5 years ago