HKU-BAL / ClairSLinks
ClairS - a deep-learning method for long-read somatic small variant calling
☆102Updated 2 weeks ago
Alternatives and similar repositories for ClairS
Users that are interested in ClairS are comparing it to the libraries listed below
Sorting:
- Variant calling tool for long-read sequencing data☆117Updated 8 months ago
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆75Updated 3 weeks ago
- A tool for somatic structural variant calling using long reads☆157Updated last month
- SV detection tool for nanopore sequence reads☆97Updated 8 months ago
- Tandem repeat expansion detection or genotyping from long-read alignments☆134Updated 2 weeks ago
- Somatic structural variant caller for long-read data☆85Updated 3 weeks ago
- Visualise and analyse nanopore (ONT) raw signals☆124Updated 3 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated this week
- Research release basecalling models and configurations☆117Updated 6 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆80Updated 8 months ago
- Quality control tools for nanopore sequencing data☆111Updated last year
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 2 months ago
- ☆126Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆113Updated 2 months ago
- Fast and accurate coordinate conversion between assemblies☆117Updated 2 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- ☆52Updated 2 months ago
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- A complete diploid human genome☆139Updated 2 months ago
- Evaluation and polishing workflows for T2T genome assemblies☆141Updated 5 months ago
- Collection of tools for the analysis of CpG data☆101Updated 5 months ago
- Methylation Phasing for Nanopore Sequencing☆49Updated 2 years ago
- WDL workflows for variant calling and assembly using ONT☆38Updated 2 months ago
- ☆121Updated 3 weeks ago
- ☆80Updated 11 months ago
- Yet another k-mer analyzer☆152Updated 2 weeks ago
- vcfdist: Accurately benchmarking phased variant calls☆84Updated 2 months ago
- ☆61Updated 4 years ago
- cDNA read preprocessing☆81Updated last year
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆61Updated this week