GoreLab / Sorghum-HapMapLinks
Hapmap-v1
☆12Updated 5 years ago
Alternatives and similar repositories for Sorghum-HapMap
Users that are interested in Sorghum-HapMap are comparing it to the libraries listed below
Sorting:
- ☆20Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆42Updated 10 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- scripts used in Rice Pangenome Projects (Evolution).☆11Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆43Updated 2 months ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆18Updated 2 years ago
- Tutorials on evolutionary genomics☆45Updated 3 years ago
- Tutorial about R package PopGenome☆43Updated 6 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆46Updated 2 months ago
- NLR-Annotator upload☆69Updated 2 years ago
- A program to call variants from genome alignment☆81Updated 3 months ago
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated 2 months ago
- ☆40Updated 2 years ago
- info and docs for the Wright Lab☆15Updated 9 years ago
- Portable solution to generate genome alignment chains using lastz☆57Updated 2 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Genome annotation pipeline☆59Updated last year
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 7 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- ☆44Updated 8 years ago
- Useful bioinformatic scripts☆57Updated 8 months ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 5 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- RepeatIdentifier☆67Updated 4 months ago
- ☆50Updated last month
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last month
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆97Updated 2 months ago
- Neural network classification of TE☆92Updated 2 months ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago