yywyaoyaowu / SolEvo_PotatoDeleLinks
Use hifi to assembly the Sol genome, and dissecting Sol evo
☆18Updated 2 years ago
Alternatives and similar repositories for SolEvo_PotatoDele
Users that are interested in SolEvo_PotatoDele are comparing it to the libraries listed below
Sorting:
- a Semi-automated pipeline for assembling T2T genome☆21Updated 2 weeks ago
- scripts used in Rice Pangenome Projects (Evolution).☆13Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆47Updated 4 months ago
- ☆37Updated last month
- ☆44Updated 2 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆48Updated 3 weeks ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆43Updated last year
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- ☆19Updated 2 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆39Updated 3 months ago
- ☆25Updated 3 years ago
- An efficient assembly tool for plant mitochondrial genome☆64Updated last year
- Centromics: visualing centromeres with multiple omics data☆24Updated 6 months ago
- ☆40Updated 2 years ago
- Genome Annotation Pipeline☆36Updated last year
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated 4 months ago
- Centromics: visualing centromeres with multiple omics data☆20Updated last year
- ☆31Updated 6 months ago
- HiCAT new project☆29Updated 4 months ago
- ☆29Updated last year
- BITACORA: A Bioinformatics tool for gene family annotation☆48Updated 3 months ago
- An Integrative Toolkit for Assembling Plant Mitochondrial Genomes Using HiFi Reads☆11Updated last month
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 7 months ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- Hapmap-v1☆12Updated 5 years ago