yywyaoyaowu / SolEvo_PotatoDeleView external linksLinks
Use hifi to assembly the Sol genome, and dissecting Sol evo
☆19May 17, 2023Updated 2 years ago
Alternatives and similar repositories for SolEvo_PotatoDele
Users that are interested in SolEvo_PotatoDele are comparing it to the libraries listed below
Sorting:
- ☆10Sep 4, 2024Updated last year
- ☆23Oct 30, 2022Updated 3 years ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- ☆14Feb 22, 2022Updated 3 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- ☆20Sep 6, 2024Updated last year
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated last year
- ☆21Aug 8, 2024Updated last year
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆109Jan 14, 2026Updated last month
- ☆27Oct 20, 2023Updated 2 years ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated last year
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 2 years ago
- ☆11Dec 15, 2025Updated 2 months ago
- A haplotype analysis toolkit for natural variation study.☆31Oct 3, 2023Updated 2 years ago
- An R package to infer and analyze synteny networks from protein sequences☆36Jul 23, 2025Updated 6 months ago
- scripts used in Rice Pangenome Projects (Evolution).☆13Oct 29, 2023Updated 2 years ago
- Quantifying Introgression via Branch Lengths☆56Sep 30, 2022Updated 3 years ago
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆15Sep 5, 2024Updated last year
- ☆16Jul 29, 2023Updated 2 years ago
- Hapmap-v1☆12Feb 3, 2020Updated 6 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆66Oct 23, 2025Updated 3 months ago
- A novel genome assembly pipeline based on deep learning☆68Dec 2, 2024Updated last year
- ☆16Jul 25, 2021Updated 4 years ago
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆104Nov 17, 2025Updated 3 months ago
- SRF: Satellite Repeat Finder☆101Jan 8, 2024Updated 2 years ago
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 7 years ago
- ☆16Jan 6, 2022Updated 4 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Mar 24, 2025Updated 10 months ago
- Genomic related tools☆75Nov 13, 2021Updated 4 years ago
- ☆18Feb 15, 2024Updated 2 years ago
- Simple tools for working with Hi-C data☆18Dec 19, 2018Updated 7 years ago
- Fast and flexible inference of the distribution of fitness effects (DFE), VCF-SFS parsing with ancestral allele and site-degeneracy annot…☆18Feb 6, 2026Updated last week
- A tool for quick and accurate calculation of syntenic diversity.☆42Sep 22, 2025Updated 4 months ago
- Make colorful identity heatmaps of genomic sequence☆128May 24, 2024Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆49Sep 22, 2025Updated 4 months ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Feb 10, 2026Updated last week
- High-precision TE Annotator☆150Dec 4, 2025Updated 2 months ago
- tomato graph pangenome☆87Dec 13, 2022Updated 3 years ago