futurefanzhang / Adaptation-to-climate-change-of-alfalfaLinks
This is the script used for analysis the population data of alfalfa
☆11Updated last year
Alternatives and similar repositories for Adaptation-to-climate-change-of-alfalfa
Users that are interested in Adaptation-to-climate-change-of-alfalfa are comparing it to the libraries listed below
Sorting:
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 5 years ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- A haplotype analysis toolkit for natural variation study.☆31Updated 2 years ago
- The IntroBlocker ancestry inference algorithm☆17Updated 2 years ago
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆18Updated last year
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- ☆41Updated 2 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 5 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆34Updated 7 months ago
- R package to draw syntenic plots in 3 different styles☆42Updated 4 months ago
- ☆27Updated 2 years ago
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Updated last year
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- Selection outlier scan with population branch statistic☆14Updated last year
- ☆25Updated 3 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- Dynamic Elongation of a Genome Assembly Path☆23Updated 3 weeks ago
- Genome haplotype assembly and assessment method☆12Updated 2 years ago
- Scripts and resources for the haploblocks manuscript☆18Updated 5 years ago
- ☆29Updated 2 years ago
- ☆33Updated 9 months ago
- ☆42Updated last year
- ☆42Updated 5 months ago
- ☆24Updated last month