futurefanzhang / Adaptation-to-climate-change-of-alfalfaLinks
This is the script used for analysis the population data of alfalfa
☆10Updated last year
Alternatives and similar repositories for Adaptation-to-climate-change-of-alfalfa
Users that are interested in Adaptation-to-climate-change-of-alfalfa are comparing it to the libraries listed below
Sorting:
- Pan-genome Construction and Population Structure Variation Calling pipeline☆42Updated 10 months ago
- A machine learning-based genotyping tool for structural variation in short reads☆22Updated 3 months ago
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆15Updated last year
- ☆40Updated 2 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- Some useful gadgets☆10Updated 3 years ago
- Genome haplotype assembly and assessment method☆12Updated last year
- a Semi-automated pipeline for assembling T2T genome☆19Updated 3 months ago
- ☆35Updated 2 weeks ago
- ☆25Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- ☆12Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- ☆42Updated last year
- scripts☆18Updated 6 years ago
- scripts used in Rice Pangenome Projects (Evolution).☆11Updated last year
- Scripts that used in our chicken T2T manuscript.☆20Updated 2 years ago
- Centromics: visualing centromeres with multiple omics data☆19Updated last year
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 5 years ago
- ☆31Updated 4 months ago
- ☆41Updated 2 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆24Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated 3 months ago
- Automated pipeline for running CoalHMM☆13Updated last year
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Genome annotation pipeline☆59Updated last year
- Portable solution to generate genome alignment chains using lastz☆57Updated 2 months ago
- Tutorials on evolutionary genomics☆45Updated 3 years ago
- BAsh-Based Automated Parallel Positive selection Analysis☆15Updated 3 months ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 5 months ago