futurefanzhang / Adaptation-to-climate-change-of-alfalfaLinks
This is the script used for analysis the population data of alfalfa
☆10Updated last year
Alternatives and similar repositories for Adaptation-to-climate-change-of-alfalfa
Users that are interested in Adaptation-to-climate-change-of-alfalfa are comparing it to the libraries listed below
Sorting:
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆16Updated last year
- ☆40Updated 2 years ago
- Genome haplotype assembly and assessment method☆12Updated last year
- a Semi-automated pipeline for assembling T2T genome☆24Updated 2 weeks ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆27Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆19Updated 2 years ago
- Some useful gadgets☆10Updated 3 years ago
- ☆40Updated 2 years ago
- BAsh-Based Automated Parallel Positive selection Analysis☆16Updated 3 weeks ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆38Updated last year
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 5 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 7 months ago
- ☆16Updated 3 years ago
- Hapmap-v1☆12Updated 5 years ago
- ☆21Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 5 months ago
- An efficient assembly tool for plant mitochondrial genome☆64Updated last year
- A haplotype analysis toolkit for natural variation study.☆30Updated 2 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago
- Graph-based Sequence Assembly Toolkit☆22Updated 11 months ago
- scripts used in Rice Pangenome Projects (Evolution).☆13Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆43Updated 2 weeks ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆41Updated last month
- Automated pipeline for running CoalHMM☆13Updated last year
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- MSMC2 Scripts☆27Updated last month