B73Ab10 genome assembly methods
☆16Jan 21, 2022Updated 4 years ago
Alternatives and similar repositories for Ab10-Assembly
Users that are interested in Ab10-Assembly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- ☆14Jul 27, 2019Updated 6 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13May 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17Nov 19, 2025Updated 8 months ago
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 4 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆26Sep 14, 2020Updated 5 years ago
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆92Jan 14, 2025Updated last year
- ☆13Oct 30, 2019Updated 6 years ago
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- ☆11Mar 14, 2026Updated 4 months ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 5 years ago
- Nextflow pipeline for scaffolding genome assemblies with Hi-C reads☆16Nov 5, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69May 22, 2021Updated 5 years ago
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 4 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- De novo annotation of young retrotransposons☆46Apr 24, 2026Updated 2 months ago
- Genome annotation pipeline☆66Jun 25, 2024Updated 2 years ago
- Codes for the lettuce resequencing project in 2020☆31Jun 28, 2021Updated 5 years ago
- Complete Genome Assembly Toolkit☆37Jul 16, 2026Updated last week
- plot genome alignment synteny☆20May 25, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆26Jan 26, 2026Updated 5 months ago
- ☆78Jun 12, 2020Updated 6 years ago
- Integrate multiple genome assemblies into a pangenome graph☆37Jun 9, 2022Updated 4 years ago
- DNA序列比对结果 可视化展示工具☆58Dec 18, 2022Updated 3 years ago
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- Phylogenetic iDentification of Subgenomes☆10Jul 7, 2022Updated 4 years ago
- Scripts and resources for the haploblocks manuscript☆18Mar 20, 2020Updated 6 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated last year
- Generate an interactive dot plot from mummer or minimap alignments☆219Jan 17, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆18Nov 21, 2024Updated last year
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- Bioinformatics scripts☆14Dec 23, 2024Updated last year
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- haplotypic duplication identification tool☆291Oct 30, 2025Updated 8 months ago
- A reliable gap filling pipeline for draft genomes☆11Sep 17, 2019Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year