dawelab / Ab10-Assembly
B73Ab10 genome assembly methods
☆16Updated 2 years ago
Alternatives and similar repositories for Ab10-Assembly:
Users that are interested in Ab10-Assembly are comparing it to the libraries listed below
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆15Updated 2 years ago
- ☆23Updated last year
- ☆16Updated 2 years ago
- ☆24Updated 3 years ago
- ☆16Updated 5 years ago
- Script to help assessing the evolutionary history of a TE family☆15Updated 5 years ago
- SINE annotation tool for plant genomes☆17Updated 11 months ago
- A pipeline for scaffolding a genome assembly using Hi-C☆12Updated 2 years ago
- plot genome alignment synteny☆20Updated 4 years ago
- Plant genome assembly and annotation pipeline using snakemake☆35Updated last year
- ☆21Updated 10 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 6 years ago
- The tools are used for displaying hic signal of genome☆23Updated 4 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆20Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆15Updated last year
- ☆22Updated 2 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- ☆13Updated last year
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆26Updated 3 years ago
- Draw a dot plot from a paf alignment☆24Updated 3 weeks ago
- Add multiple thread function for genome comparison☆15Updated 3 years ago
- ☆15Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆21Updated last year
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- repository for code used in analysis of open wild wheat consortium☆15Updated 3 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 3 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago