dawelab / Ab10-AssemblyLinks
B73Ab10 genome assembly methods
☆16Updated 3 years ago
Alternatives and similar repositories for Ab10-Assembly
Users that are interested in Ab10-Assembly are comparing it to the libraries listed below
Sorting:
- plot genome alignment synteny☆21Updated 5 years ago
- ☆25Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- ☆15Updated 3 years ago
- This python script can be used to detect Whole-genome duplication (WGD) with the dS based method.☆25Updated 6 years ago
- ☆27Updated 3 months ago
- Phylogenetic iDentification of Subgenomes☆10Updated 3 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Construct and Analyze the North American Vitis pangenome☆23Updated last year
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 8 months ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- ☆30Updated 5 years ago
- A pipeline for scaffolding a genome assembly using Hi-C☆13Updated 2 years ago
- Study of TE evolution in a population of genomes☆9Updated last year
- SINE annotation tool for plant genomes☆17Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 5 months ago
- ☆15Updated 5 years ago
- Script to help assessing the evolutionary history of a TE family☆16Updated 5 years ago
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated 2 weeks ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated last month
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 9 months ago
- Identification of conserved non-coding sequences in plants☆21Updated 2 months ago
- ☆21Updated 2 years ago
- Scripts for NGS processing☆17Updated 7 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 4 years ago