iTAK
☆48May 22, 2024Updated last year
Alternatives and similar repositories for iTAK
Users that are interested in iTAK are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- my commonly used perl script☆19Aug 28, 2020Updated 5 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Mar 6, 2026Updated 3 weeks ago
- ☆11Mar 14, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆17Nov 19, 2025Updated 4 months ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆119Apr 7, 2021Updated 4 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆119Jul 22, 2025Updated 8 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆33Jan 3, 2022Updated 4 years ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆11Feb 25, 2021Updated 5 years ago
- ☆29Jul 16, 2022Updated 3 years ago
- ☆10Jun 13, 2020Updated 5 years ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆20Oct 12, 2025Updated 5 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Oct 1, 2021Updated 4 years ago
- ☆86Jul 12, 2024Updated last year
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated last year
- Version 5 of the CAFE phylogenetics software☆164Mar 16, 2026Updated last week
- Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools☆11Apr 26, 2020Updated 5 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- GOMAP-Singularity is the containerized version of GOMAP☆11Jul 16, 2023Updated 2 years ago
- KOBAS: a command line tool for identifying significant pathways from genomic data☆32Mar 7, 2010Updated 16 years ago
- ☆27Aug 29, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- PASA software☆199Feb 12, 2025Updated last year
- ☆15May 31, 2020Updated 5 years ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆16Nov 23, 2023Updated 2 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Jul 13, 2020Updated 5 years ago
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Nov 7, 2024Updated last year
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Download NCBI assembly genomes with ftp. rsync, ascp☆12Aug 2, 2022Updated 3 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Feb 13, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A box of genomics tools☆22Aug 26, 2020Updated 5 years ago
- A program to call variants from genome alignment☆82Apr 29, 2025Updated 10 months ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- Robust Eukaryotic Annotation Toolkit☆17Feb 28, 2025Updated last year
- A scaffold assembling pipeline for stLFR reads.☆14Mar 15, 2021Updated 5 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated last year