Alternatives and similar repositories for Mo17_genome_assembly:

Users that are interested in Mo17_genome_assembly are comparing it to the libraries listed below

• baduelp / public
  ☆16Updated 5 months ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• LAILAB-CAU / update-Mo17
  ☆24Updated last year
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• Zhuxitong / ppsPCP
  A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline
  ☆26Updated 3 years ago
• yongzhiyang2012 / WGDdetector
  ☆21Updated 5 years ago
• dongwei1220 / EasySpeciesTree
  Easily construct the ML species tree with single-copy gene shared by different species.
  ☆25Updated 6 years ago
• wtsi-hpag / scanPAV
  Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
  ☆29Updated 7 years ago
• oushujun / MTEC
  A repo contains historical and updated MTEC libraries.
  ☆17Updated 5 years ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆42Updated last year
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆25Updated 3 months ago
• AnimalGenomicsETH / bovine-graphs
  Integrate multiple genome assemblies into a pangenome graph
  ☆33Updated 2 years ago
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• vgteam / giraffe-sv-paper
  ☆42Updated 10 months ago
• Wendellab / CisTransRegulation
  Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum
  ☆16Updated last year
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆28Updated 4 years ago
• Zhanmengtao / bin
  scripts
  ☆15Updated 6 years ago
• HuffordLab / Maize_NC358
  The repository for codes developed to generated the Maize NC358 assemblies and analyses.
  ☆11Updated 4 years ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆38Updated 6 months ago
• aubombarely / GenoToolBox
  A box of genomics tools
  ☆21Updated 4 years ago
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆25Updated 4 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• andreaminio / HaploSync
  Tools for haplotype-wise reconstruction of pseudomolecules
  ☆20Updated 5 months ago
• INTABiotechMJ / MITE-Tracker
  MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes
  ☆18Updated last year
• clemgoub / rm2gff3
  Convert RepeatMasker ".out" file into a gff3 with colors!!!
  ☆20Updated 4 years ago
• dwinter / repeatR
  read and analyse RepeatMasker output
  ☆24Updated last year
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆30Updated last year
• malonge / CallSV
  A long-read SV calling pipeline
  ☆11Updated 3 years ago
• eswlab / orphan-prediction
  methods for orphan gene prediction paper optimization
  ☆25Updated 3 years ago