Tao Yan's Plot Toolkit
☆12Aug 20, 2019Updated 6 years ago
Alternatives and similar repositories for ttplot
Users that are interested in ttplot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- Parallel Genomic evaluations in R☆16Sep 26, 2024Updated last year
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 6 months ago
- Perform GWAS with gemma in a simple pipeline☆27Apr 26, 2025Updated 11 months ago
- Parse command-line arguments and simple variable interpolation☆17Feb 6, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Nov 26, 2023Updated 2 years ago
- Simple script to generate whole-genome coverage plots☆19Jun 23, 2015Updated 10 years ago
- Hapmap-v1☆12Feb 3, 2020Updated 6 years ago
- ☆13Mar 27, 2026Updated last week
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Mar 4, 2025Updated last year
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- ☆16Jul 29, 2023Updated 2 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆15Jun 24, 2025Updated 9 months ago
- Specific Transposable Element Aligner (HERV-K)☆16Sep 12, 2019Updated 6 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Jan 23, 2020Updated 6 years ago
- ☆11Apr 11, 2019Updated 6 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- R package to create manhattan plots using ggplot☆32Jun 17, 2021Updated 4 years ago
- dream of red mansions红楼梦笔记☆18Feb 28, 2023Updated 3 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Feb 10, 2026Updated last month
- An experimental tool to estimate the similarity between all pairs of contigs☆40Apr 12, 2021Updated 4 years ago
- Scripts for NGS processing☆16Sep 6, 2017Updated 8 years ago
- Transposable element polymorphism identification☆34Jul 22, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆23Oct 30, 2022Updated 3 years ago
- Various bioinformatics tools☆20Oct 29, 2024Updated last year
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 4 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆20Oct 28, 2024Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆15Feb 6, 2026Updated 2 months ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- A Pedantic FASTA Parser and Tool Set☆14Apr 22, 2020Updated 5 years ago
- R scripts for NGS data visualization☆13Oct 1, 2025Updated 6 months ago
- Dockerfile repository for Bioinformatics☆37Dec 21, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 6 years ago
- ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting☆14Aug 28, 2019Updated 6 years ago
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 4 years ago
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- A Shiny App for visualizing genomic data☆19Apr 24, 2022Updated 3 years ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the…☆17Mar 19, 2023Updated 3 years ago