Alternatives and similar repositories for ttplot:

Users that are interested in ttplot are comparing it to the libraries listed below

• YaoLab-Bioinfo / LIRBase
  A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
  ☆16Updated 3 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆25Updated 2 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 2 years ago
• AppliedBioinformatics / Brassica_oleracea_rapa_napus_code
  Code for the Brassica oleracea/rapa/napus genomic comparison
  ☆16Updated 3 years ago
• evodify / allele-specific-expression
  Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)
  ☆11Updated 6 years ago
• jdaron / CLARI-TE
  ☆10Updated 10 years ago
• hemstrow / snpR
  ☆30Updated 3 weeks ago
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆12Updated 3 weeks ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 2 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 3 months ago
• xhhuanglab / QTN_scripts
  ☆9Updated 4 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• whweve / IntAssoPlot
  ☆16Updated last year
• akiomiyao / tif
  Transposon Insertion Finder - Detection of new TE insertions in NGS data
  ☆20Updated 2 years ago
• MorrellLAB / sequence_handling
  A series of scripts to automate sequence workflows
  ☆19Updated 7 months ago
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆20Updated 9 months ago
• bcbc-group / CyVerese_SNP_calling_webinar
  ☆10Updated 4 years ago
• wheatgenetics / owwc
  repository for code used in analysis of open wild wheat consortium
  ☆16Updated 3 years ago
• ryhui / imputation-pipeline
  ☆10Updated 4 years ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆37Updated last year
• caulilin / QTG_Seq
  ☆21Updated 6 years ago
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆17Updated 5 years ago
• xuzhougeng / binmapr
  R package for binmap
  ☆13Updated last year
• IBEXCluster / HPC-GVCW
  Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.
  ☆12Updated 10 months ago
• esctrionsit / snphub
  A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.
  ☆19Updated 5 months ago
• danjlawson / badMIXTURE
  R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes
  ☆25Updated 5 years ago
• jmonlong / sveval
  Functions to compare a SV call sets against a truth set.
  ☆29Updated 11 months ago
• ZhangRenL / geneHapR
  ☆13Updated 6 months ago
• JaeYoonKim72 / GMStool
  ☆16Updated 4 years ago
• jaredgk / PPP
  Repository for pipeline code
  ☆24Updated last year