☆27Aug 29, 2025Updated 7 months ago
Alternatives and similar repositories for homotools
Users that are interested in homotools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated last year
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated 10 months ago
- ☆17Jan 14, 2026Updated 2 months ago
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- Computational Analysis of Gene Expression Evolution☆45Aug 19, 2025Updated 7 months ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆83Dec 3, 2025Updated 3 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Apr 10, 2024Updated last year
- Genome alignment and synteny plots☆34Updated this week
- A pipeline for genomic variant detection with genome assemblies at population scale☆39Jun 3, 2025Updated 9 months ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆20Oct 12, 2025Updated 5 months ago
- Novo&Stitch is a genome assembly reconciliation tool based on optical map.☆10Oct 21, 2019Updated 6 years ago
- ☆24Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RepeatIdentifier☆72Mar 19, 2025Updated last year
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2024Updated last year
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Nov 7, 2024Updated last year
- ☆16Apr 3, 2023Updated 2 years ago
- ☆22Feb 26, 2026Updated last month
- Align subreads to ccs reads☆14Jun 11, 2025Updated 9 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆33Jan 3, 2022Updated 4 years ago
- SV calling for diploid assemblies☆31Mar 22, 2024Updated 2 years ago
- DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.☆22Aug 6, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆54Feb 27, 2020Updated 6 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Mar 5, 2023Updated 3 years ago
- ☆44Jul 23, 2025Updated 8 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Sep 5, 2025Updated 6 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Mar 3, 2025Updated last year
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- ☆45Dec 11, 2025Updated 3 months ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Oct 22, 2018Updated 7 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Apr 13, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A program for assessing the T2T genome continuity☆92Feb 28, 2026Updated last month
- ☆16Jul 25, 2021Updated 4 years ago
- A dotplot generator for large chromosomes☆43Oct 3, 2023Updated 2 years ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆12Feb 22, 2024Updated 2 years ago
- This is the standalone version of the EviAnn pipeline☆143Mar 13, 2026Updated 2 weeks ago
- Detecting multi-genome synteny using minimizer graph mapping☆104Mar 18, 2026Updated last week
- the pangenome graph evaluator☆29Apr 12, 2021Updated 4 years ago