YuetongXU / CropGBM
☆24Updated 9 months ago
Alternatives and similar repositories for CropGBM:
Users that are interested in CropGBM are comparing it to the libraries listed below
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆13Updated last year
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- A pipeline for isoseq☆23Updated 6 years ago
- ☆15Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆34Updated 3 months ago
- A tool for performing collinearity-incorporating homology inference☆29Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 9 months ago
- ☆22Updated 2 years ago
- Codes for the lettuce resequencing project in 2020☆30Updated 3 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 3 months ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 4 years ago
- tutorial on pggb☆32Updated 2 months ago
- trans-species prediction of TFBS in plants☆13Updated 3 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆26Updated 7 months ago
- ☆21Updated 6 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- ☆42Updated last year
- ☆29Updated 6 months ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆53Updated this week
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆13Updated 2 years ago
- Scripts to convert between file formats for various analyses☆15Updated last month
- BITACORA: A Bioinformatics tool for gene family annotation☆43Updated 11 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy☆11Updated 6 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 6 months ago
- info and docs for the Wright Lab☆14Updated 9 years ago