YuetongXU / CropGBM
☆24Updated 8 months ago
Alternatives and similar repositories for CropGBM:
Users that are interested in CropGBM are comparing it to the libraries listed below
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆13Updated last year
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆34Updated 2 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 3 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆18Updated 4 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated 5 months ago
- trans-species prediction of TFBS in plants☆13Updated 3 years ago
- ☆22Updated 2 years ago
- ☆15Updated 2 years ago
- A deeplearning driving bioinformatic toolkit.☆15Updated last month
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆20Updated 2 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆52Updated this week
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 2 months ago
- ☆24Updated 2 years ago
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago
- ☆42Updated last year
- tutorial on pggb☆32Updated last month
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- Codes for the lettuce resequencing project in 2020☆28Updated 3 years ago
- A pipeline for isoseq☆23Updated 6 years ago
- ☆13Updated 4 years ago
- A tool for performing collinearity-incorporating homology inference☆28Updated last year
- Repository for code used for publications☆27Updated last month
- Pan-genome Construction and Population Structure Variation Calling pipeline☆37Updated 5 months ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 7 months ago
- The cattle Genotype-Tissue Expression atlas v1☆23Updated last year
- A novel genome assembly pipeline based on deep learning☆60Updated 2 months ago
- Genome haplotype assembly and assessment method☆12Updated last year
- ☆22Updated 2 years ago