baoxingsong / dCNSLinks
conserved non-coding sequence
☆14Updated 3 years ago
Alternatives and similar repositories for dCNS
Users that are interested in dCNS are comparing it to the libraries listed below
Sorting:
- ☆16Updated 5 years ago
- Identification of conserved non-coding sequences in plants☆29Updated 3 weeks ago
- Script to help assessing the evolutionary history of a TE family☆16Updated 6 years ago
- ☆43Updated last year
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- ☆29Updated 2 years ago
- Construct and Analyze the North American Vitis pangenome☆25Updated 2 months ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated 2 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- Yet another Hi-C scaffolding tool☆22Updated last year
- B73Ab10 genome assembly methods☆17Updated 3 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- ☆28Updated 3 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 4 months ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- A long-read SV calling pipeline☆12Updated 4 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆29Updated 4 months ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 5 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated last year
- ☆14Updated 3 years ago
- ☆31Updated 5 years ago
- ☆24Updated 2 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated 2 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- Whole Genome Annotation Pipeline☆16Updated 4 months ago