wheatgenetics / owwcLinks
repository for code used in analysis of open wild wheat consortium
☆16Updated 3 years ago
Alternatives and similar repositories for owwc
Users that are interested in owwc are comparing it to the libraries listed below
Sorting:
- ☆16Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆16Updated 2 years ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- ☆15Updated 5 years ago
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Updated 5 years ago
- R package to draw syntenic plots in 3 different styles☆42Updated this week
- ☆27Updated 2 years ago
- Likelihood-based Selective Sweep Detection☆40Updated last year
- ☆16Updated 10 months ago
- Build haplotye and generate figures☆18Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- conserved non-coding sequence☆14Updated 3 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 5 months ago
- plot genome alignment synteny☆21Updated 5 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- The IntroBlocker ancestry inference algorithm☆15Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- ☆15Updated 3 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 2 months ago
- ☆42Updated last year
- ☆14Updated 3 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 9 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆27Updated last year
- ☆23Updated last year
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago