wheatgenetics / owwcLinks
repository for code used in analysis of open wild wheat consortium
☆16Updated 3 years ago
Alternatives and similar repositories for owwc
Users that are interested in owwc are comparing it to the libraries listed below
Sorting:
- ☆15Updated last year
- ☆9Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆17Updated 6 years ago
- Build haplotye and generate figures☆18Updated 3 years ago
- ☆12Updated 4 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Updated 5 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆15Updated 5 years ago
- ☆14Updated 3 years ago
- conserved non-coding sequence☆14Updated 3 years ago
- ☆15Updated 3 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 8 months ago
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- ☆16Updated 7 months ago
- ☆25Updated 2 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- The tools are used for displaying hic signal of genome☆23Updated 4 years ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆13Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 4 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 2 months ago
- ☆15Updated last year
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 3 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆10Updated 8 months ago
- ☆22Updated last year
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 7 months ago
- Deleterious mutation prediction pipeline☆13Updated 5 months ago
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆10Updated 4 years ago