MarcooLopez / Genomic-Selection
☆24Updated 4 years ago
Alternatives and similar repositories for Genomic-Selection:
Users that are interested in Genomic-Selection are comparing it to the libraries listed below
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆12Updated 7 years ago
- lme4 for Genomic Selection☆16Updated 3 years ago
- ☆34Updated 3 years ago
- GWAS software that can handle autopolyploids☆28Updated 4 months ago
- R package for random-effect multiple QTL mapping in autopolyploids☆9Updated 3 years ago
- Simulation of Pleiotropic, Linked and Epistatic Phenotypes☆12Updated 11 months ago
- https://filippob.github.io/introduction_to_gwas/☆19Updated 7 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆49Updated last year
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆34Updated 2 months ago
- Data Simulation for Life Science and Breeding☆28Updated this week
- Repository for code used for publications☆27Updated last month
- Genetic maps in autopolyploids☆27Updated 11 months ago
- Perform GWAS using the FarmCPU model.☆23Updated 2 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆56Updated 3 months ago
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆41Updated 2 months ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆22Updated 6 months ago
- ☆29Updated this week
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆28Updated 3 months ago
- A haplotype analysis toolkit for natural variation study.☆29Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆13Updated last year
- R package for pedigree inference based on SNP data☆26Updated 8 months ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆30Updated last year
- blupADC:An useful tool for animal and plant breeding☆24Updated 2 months ago
- Methods for examining PCA locally along the genome.☆75Updated 6 months ago
- 2024 BreedWheat Genomic Selection pipeline☆12Updated last year
- ☆105Updated last week
- Build haplotye and generate figures☆18Updated 3 years ago
- An R package to compute relationship matrices for diploid and autotetraploid species☆18Updated last year
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆22Updated 2 months ago