DerKevinRiehl / TransposonUltimateLinks
TransposonUltimate - a holistic set of tools for transposon identification
β85Updated 3 years ago
Alternatives and similar repositories for TransposonUltimate
Users that are interested in TransposonUltimate are comparing it to the libraries listed below
Sorting:
- π LiftOn: Accurate annotation mapping for GFF/GTF across assembliesβ116Updated last month
- NLR-Annotator uploadβ75Updated 2 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out filesβ84Updated 4 years ago
- Collection of tools for the analysis of CpG dataβ102Updated 5 months ago
- Neural network classification of TEβ97Updated 2 months ago
- Dfam Transposable Element Tools Docker container.β101Updated last week
- A novel genome assembly pipeline based on deep learningβ67Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Tβ¦β59Updated 2 years ago
- Analysis of convergence between organismal traits and DNA/protein sequencesβ60Updated last month
- A list of software for pangenomicsβ164Updated 2 weeks ago
- This is the standalone version of the EviAnn pipelineβ134Updated last week
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.β37Updated 4 years ago
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity β¦β93Updated last month
- Same species annotation lift over pipeline.β98Updated 2 years ago
- β84Updated last year
- Mapping pipeline for data generated using Arima-HiCβ81Updated last year
- Application of pan-genome for populationβ116Updated 2 months ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing dataβ111Updated 3 months ago
- source code for EVMβ119Updated last year
- List of genome assembly toolsβ88Updated 3 weeks ago
- PhyloAcc a software to detect the changes of conservation of a genomic regionβ34Updated last month
- Pangenome-based genome inferenceβ152Updated 3 weeks ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing dataβ105Updated 6 months ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsisβ¦β53Updated 5 years ago
- PacBio Assembly Tool Suite: Reads in β¨ Assembly outβ118Updated 5 years ago
- Tandem repeat genotyping and visualization from PacBio HiFi dataβ129Updated 2 weeks ago
- paml documentation and tutorialsβ64Updated 7 months ago
- β71Updated 5 years ago
- Workflow for Building Microsynteny Networksβ58Updated 3 years ago
- Genomic related toolsβ73Updated 4 years ago