DerKevinRiehl / TransposonUltimate
TransposonUltimate - a holistic set of tools for transposon identification
☆82Updated 2 years ago
Alternatives and similar repositories for TransposonUltimate:
Users that are interested in TransposonUltimate are comparing it to the libraries listed below
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆78Updated 3 years ago
- NLR-Annotator upload☆62Updated last year
- A novel genome assembly pipeline based on deep learning☆59Updated last month
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆48Updated 4 years ago
- ☆26Updated last month
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆85Updated last month
- Neural network classification of TE☆87Updated 2 years ago
- ☆73Updated 6 months ago
- Genome annotation pipeline☆56Updated 6 months ago
- Algorithm For Gene Order Reconstruction in Ancestors☆72Updated 2 months ago
- Genomic related tools☆71Updated 3 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 2 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆52Updated last year
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆29Updated 3 years ago
- Collection of tools for the analysis of CpG data☆75Updated 10 months ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆70Updated last month
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆61Updated 5 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆58Updated 3 months ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆106Updated last week
- Reference-free profiling of polyploid genomes☆111Updated 6 months ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆95Updated last year
- ☆43Updated 8 years ago
- DNA序列比对结果 可视化展示工具☆44Updated 2 years ago
- Same species annotation lift over pipeline.☆96Updated last year
- A pipeline used to identify different modes of duplicated gene pairs☆94Updated 4 years ago
- ☆74Updated 3 months ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆114Updated 4 years ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆47Updated 6 months ago
- Workflow for Building Microsynteny Networks☆48Updated 2 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆65Updated 3 years ago