DerKevinRiehl / TransposonUltimateLinks
TransposonUltimate - a holistic set of tools for transposon identification
β84Updated 3 years ago
Alternatives and similar repositories for TransposonUltimate
Users that are interested in TransposonUltimate are comparing it to the libraries listed below
Sorting:
- NLR-Annotator uploadβ68Updated 2 years ago
- π LiftOn: Accurate annotation mapping for GFF/GTF across assembliesβ107Updated last week
- Few scripts facilitating the extraction of info from Repeat Masker .out filesβ81Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Tβ¦β57Updated 2 years ago
- This is the standalone version of the EviAnn pipelineβ100Updated this week
- Neural network classification of TEβ90Updated last month
- β80Updated last year
- A list of software for pangenomicsβ119Updated this week
- Dfam Transposable Element Tools Docker container.β95Updated 2 weeks ago
- Collection of tools for the analysis of CpG dataβ86Updated last week
- Mapping pipeline for data generated using Arima-HiCβ78Updated last year
- source code for EVMβ112Updated 7 months ago
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity β¦β87Updated last year
- Same species annotation lift over pipeline.β98Updated last year
- Analysis of convergence between organismal traits and DNA/protein sequencesβ55Updated 2 weeks ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.β36Updated 4 years ago
- β44Updated 8 years ago
- Make colorful identity heatmaps of genomic sequenceβ117Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formatsβ67Updated 4 years ago
- A pipeline used to identify different modes of duplicated gene pairsβ102Updated 2 weeks ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsisβ¦β51Updated 5 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic regionβ32Updated 3 months ago
- A novel genome assembly pipeline based on deep learningβ62Updated 7 months ago
- paml documentation and tutorialsβ60Updated 2 months ago
- DNAεΊεζ―ε―Ήη»ζ ε―θ§εε±η€Ίε·₯ε ·β52Updated 2 years ago
- Best practices and workflow for genome annotationβ77Updated 3 months ago
- β77Updated 5 years ago
- Genomic related toolsβ71Updated 3 years ago
- A (very) simple script to QC Hi-C data.β25Updated 7 months ago
- Simple pileup-based variant callerβ91Updated 2 months ago