lfaino / LoReAnLinks
Long Reads Annotation pipeline
☆73Updated 3 years ago
Alternatives and similar repositories for LoReAn
Users that are interested in LoReAn are comparing it to the libraries listed below
Sorting:
- De novo annotation of young retrotransposons☆47Updated 3 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Same species annotation lift over pipeline.☆97Updated 2 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆34Updated last year
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated last year
- Tools to annotate genomes using long read transcriptomics data☆45Updated 5 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆95Updated 9 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 3 years ago
- ☆30Updated 5 years ago
- ☆45Updated 9 years ago
- Methylation Phasing for Nanopore Sequencing☆49Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 5 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆79Updated last year
- Lima - Demultiplex Barcoded PacBio Samples☆68Updated 9 months ago
- ☆32Updated 4 months ago
- perSVade: personalized Structural Variation detection☆40Updated 2 weeks ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- ☆52Updated 4 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- ☆71Updated 5 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Structural variant caller for real-time long-read sequencing data☆61Updated 3 years ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 5 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆32Updated 5 years ago
- ☆78Updated 5 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆34Updated this week
- Simple pileup-based variant caller☆95Updated 9 months ago