sagnikbanerjee15 / FinderLinks
A fully automated gene annotator from RNA-Seq expression data
☆61Updated 2 years ago
Alternatives and similar repositories for Finder
Users that are interested in Finder are comparing it to the libraries listed below
Sorting:
- FastOMA is a scalable software package to infer orthology relationship.☆77Updated last week
- Tiberius is a deep learning gene finder.☆67Updated last week
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆58Updated last year
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆107Updated last week
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆72Updated 9 months ago
- Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes☆22Updated 3 years ago
- A list of software for pangenomics☆119Updated this week
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆86Updated last year
- Scripting analyses of genomes in Ensembl Plants☆40Updated last month
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆43Updated last week
- ☆63Updated last week
- A local-haplotagging-based small and structural variant caller☆78Updated 2 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- ☆74Updated last week
- Interactive quality assessment of genome assemblies☆102Updated 2 months ago
- Best practices and workflow for genome annotation☆77Updated 3 months ago
- This is the standalone version of the EviAnn pipeline☆100Updated this week
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆80Updated 7 months ago
- A program for detection of tRNA genes☆63Updated 2 years ago
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆70Updated 3 years ago
- Synteny Imager☆63Updated 10 months ago
- paml documentation and tutorials☆60Updated 2 months ago
- Neural network classification of TE☆90Updated last month
- Workflow for Building Microsynteny Networks☆55Updated 2 years ago
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 7 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- List of genome assembly tools☆70Updated 2 weeks ago
- Bioinformatics tool for Locus Visualisation☆111Updated 2 months ago
- NLR annotation tool☆31Updated last year