Transposable Elements MOvement detection using LOng reads
☆25Mar 31, 2026Updated last week
Alternatives and similar repositories for TrEMOLO
Users that are interested in TrEMOLO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 29, 2020Updated 6 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago
- ☆10Jul 1, 2020Updated 5 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Jul 27, 2023Updated 2 years ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆105May 31, 2025Updated 10 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Annotation helper tool for the manual curation of transposable element consensus sequences☆54Mar 5, 2025Updated last year
- PiRATE (Pipeline to Retrieve and Annotate Transposable Elements)☆19Nov 10, 2024Updated last year
- TEspeX - pipeline for Transposable Elements expression quantification☆22Aug 24, 2023Updated 2 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Mar 25, 2026Updated 2 weeks ago
- meta-pipeline for repetitive element de-fragmentation and annotation☆28Oct 1, 2020Updated 5 years ago
- GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered …☆246Updated this week
- Drosophila transposable element canonical sequences☆30Jul 11, 2022Updated 3 years ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- Estimating repeat spectra and genome length from low-coverage genome skims☆12Aug 6, 2023Updated 2 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆23Jun 5, 2021Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Feb 14, 2022Updated 4 years ago
- ☆27Feb 19, 2025Updated last year
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Dec 1, 2023Updated 2 years ago
- read and analyse RepeatMasker output☆27May 22, 2023Updated 2 years ago
- A Julia package for handle genome graph in the GFA format.☆11Sep 2, 2022Updated 3 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated 11 months ago
- TE tools for TE RNASeq and smallRNASeq analysis with galaxy☆12Apr 2, 2021Updated 5 years ago
- Earl Grey: A fully automated TE curation and annotation pipeline☆204Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Mobile Genetic Elements Retrieving Tool☆16Feb 11, 2026Updated 2 months ago
- Domain based annotation of transposable elements☆23Oct 8, 2025Updated 6 months ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Jul 31, 2017Updated 8 years ago
- transposable element typing pipeline☆19Mar 8, 2024Updated 2 years ago
- R package to explore active transposable elements with RNA-seq data☆21Nov 25, 2022Updated 3 years ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆116Feb 12, 2026Updated 2 months ago
- R functions to dead-reckon reckon animal movement from raw motion sensor data☆10Aug 1, 2023Updated 2 years ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆114Sep 2, 2025Updated 7 months ago
- Analysis of transposable elements☆13Dec 4, 2025Updated 4 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- Transposable Elements Representation Learner (TERL)☆20Jun 2, 2025Updated 10 months ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆33Sep 11, 2025Updated 7 months ago
- Linear-time de novo Long Read Assembler☆41Mar 19, 2026Updated 3 weeks ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆37Jun 6, 2022Updated 3 years ago
- ☆16Nov 25, 2019Updated 6 years ago