mfruzan / CoreDetectorLinks
☆26Updated 3 weeks ago
Alternatives and similar repositories for CoreDetector
Users that are interested in CoreDetector are comparing it to the libraries listed below
Sorting:
- ☆25Updated 10 months ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 2 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Differential k-mer analysis☆36Updated last year
- ☆20Updated this week
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated 9 months ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes☆38Updated 9 months ago
- Multi-genome synteny block visualization tool☆42Updated 5 months ago
- Linear-time de novo Long Read Assembler☆42Updated 5 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆40Updated 3 months ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Updated 2 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 5 months ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated 9 months ago
- Statistics and analysis for variation graphs☆41Updated 7 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Genome alignment and synteny plots☆30Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- ☆37Updated last year
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- FastK based version of Merqury☆26Updated last month
- A Hi-C scaffolding method☆23Updated 3 years ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆25Updated last year
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 2 months ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆28Updated 3 months ago
- ☆36Updated last week
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- ☆17Updated last year
- ☆27Updated last year