mfruzan / CoreDetectorLinks
☆26Updated 2 months ago
Alternatives and similar repositories for CoreDetector
Users that are interested in CoreDetector are comparing it to the libraries listed below
Sorting:
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Yet another Hi-C scaffolding tool☆22Updated 10 months ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 4 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated this week
- ☆24Updated this week
- Chromosome-level synteny plotting using orthologous regions☆29Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- ☆28Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆27Updated last week
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- Genome alignment and synteny plots☆31Updated 2 years ago
- Differential k-mer analysis☆37Updated last year
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 4 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆34Updated 3 months ago
- Multi-genome synteny block visualization tool☆44Updated 7 months ago
- Computational Analysis of Gene Expression Evolution☆43Updated last month
- A Hi-C scaffolding method☆22Updated 3 years ago
- Infering ancestral synteny with hierarchical orthologous groups☆29Updated last week
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Updated 2 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.☆18Updated last year
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 5 months ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 3 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆18Updated 4 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Consensus genome annotation using OMA☆26Updated 3 months ago
- Ploidy agnostic phasing pipeline and algorithm☆47Updated last year