Codon-Aware Multiple Sequence Alignments
☆19Nov 15, 2024Updated last year
Alternatives and similar repositories for coati
Users that are interested in coati are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆12Nov 25, 2024Updated last year
- ☆16Jan 6, 2022Updated 4 years ago
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 8 months ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆19Mar 31, 2026Updated 5 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆32Jul 13, 2026Updated 2 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆34Jun 1, 2022Updated 4 years ago
- ☆16Apr 11, 2026Updated 5 months ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆18May 27, 2024Updated 2 years ago
- Graph Clustering Merger☆36Mar 25, 2024Updated 2 years ago
- EcoliTyper: A species-optimized computational pipeline for comprehensive genotyping and surveillance of Escherichia coli. Perfect for cli…☆29Aug 9, 2026Updated last month
- machine learning applications for dadi☆16Jan 23, 2025Updated last year
- The repository serves as a public and official hosting of the pSONIC program (Conover et al., 2021).☆21Sep 9, 2021Updated 5 years ago
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆258Jun 25, 2026Updated 2 months ago
- Renames headers in FASTA file☆13Jun 28, 2017Updated 9 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆63Jul 5, 2026Updated 2 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆18Sep 19, 2020Updated 6 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 6 years ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆42Apr 17, 2026Updated 5 months ago
- Inference of Ortholog Groups using Hidden Markov Models☆39Updated this week
- Stream Processing ToolKit☆18Aug 14, 2015Updated 11 years ago
- Mapping pipeline for data generated using Arima-HiC☆85May 22, 2024Updated 2 years ago
- PAGAN2 multiple sequence aligner☆12Sep 4, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆12Feb 16, 2026Updated 7 months ago
- PHYLIP package starting with version 4.0a☆20Sep 4, 2026Updated 2 weeks ago
- An R package to infer and analyze synteny networks from protein sequences☆43Jul 23, 2025Updated last year
- A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…☆45Apr 25, 2024Updated 2 years ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 6 months ago
- Sweep Inference Framework (controlling for correlation)☆29Jul 10, 2024Updated 2 years ago
- Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraplo…☆16Jul 30, 2026Updated last month
- Hierarchical Alignment Format☆188Sep 1, 2026Updated 2 weeks ago
- Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.☆11Nov 14, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆37Sep 11, 2025Updated last year
- Evolutionary Sparse Learning - Paired Species Contrast☆17Jul 22, 2026Updated last month
- ☆27Dec 3, 2025Updated 9 months ago
- Multi-genome synteny block visualization tool☆66Updated this week
- Repository for the Instructor Trainers community☆12Sep 4, 2026Updated 2 weeks ago
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 4 years ago
- ☆12Jun 12, 2023Updated 3 years ago