Codon-Aware Multiple Sequence Alignments
☆20Nov 15, 2024Updated last year
Alternatives and similar repositories for coati
Users that are interested in coati are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆13Nov 25, 2024Updated last year
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 4 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆30Feb 23, 2026Updated 2 months ago
- ☆16Jan 6, 2022Updated 4 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆34Jun 1, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Mar 31, 2026Updated last month
- ☆16Apr 11, 2026Updated last month
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆17May 27, 2024Updated last year
- Graph Clustering Merger☆36Mar 25, 2024Updated 2 years ago
- ☆25Dec 3, 2025Updated 5 months ago
- The repository serves as a public and official hosting of the pSONIC program (Conover et al., 2021).☆21Sep 9, 2021Updated 4 years ago
- machine learning applications for dadi☆17Jan 23, 2025Updated last year
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆245Apr 30, 2026Updated 3 weeks ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆59Jan 7, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Renames headers in FASTA file☆13Jun 28, 2017Updated 8 years ago
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- Stream Processing ToolKit☆17Aug 14, 2015Updated 10 years ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆39May 12, 2026Updated last week
- PHYLIP package starting with version 4.0a☆19May 14, 2026Updated last week
- ☆12Feb 16, 2026Updated 3 months ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Mapping pipeline for data generated using Arima-HiC☆84May 22, 2024Updated last year
- Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraplo…☆15May 7, 2026Updated 2 weeks ago
- A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…☆44Apr 25, 2024Updated 2 years ago
- Hierarchical Alignment Format☆183Updated this week
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆33Sep 11, 2025Updated 8 months ago
- Sweep Inference Framework (controlling for correlation)☆28Jul 10, 2024Updated last year
- PAGAN2 multiple sequence aligner☆12Jul 2, 2024Updated last year
- Whole genome visualization and comparative genomics in R☆22Feb 18, 2025Updated last year
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆32Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Function hook, code injection, monitoring☆14Jul 12, 2018Updated 7 years ago
- ☆12Jun 12, 2023Updated 2 years ago
- Multi-genome synteny block visualization tool☆57May 12, 2026Updated last week
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Jul 28, 2025Updated 9 months ago
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated last year
- Sex assignment through coverage☆20May 23, 2025Updated 11 months ago
- ☆13May 13, 2024Updated 2 years ago