jamiemcg / BUSCO_phylogenomicsLinks
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
☆68Updated 7 months ago
Alternatives and similar repositories for BUSCO_phylogenomics
Users that are interested in BUSCO_phylogenomics are comparing it to the libraries listed below
Sorting:
- ☆73Updated 2 months ago
- ☆26Updated 2 months ago
- PhyloFisher is a software package written in Python3 that can be used for the creation, analysis, and visualization of phylogenomic datas…☆32Updated last week
- Synteny Imager☆62Updated 9 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆42Updated 2 months ago
- ☆71Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 4 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 6 months ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆53Updated last week
- Reference-free profiling of polyploid genomes☆116Updated 10 months ago
- Tutorials on phylogenetic and phylogenomic inference☆48Updated last month
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- NLR-Annotator upload☆66Updated last year
- This is the standalone version of the EviAnn pipeline☆91Updated this week
- paml documentation and tutorials☆56Updated 2 weeks ago
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆73Updated last month
- Neural network classification of TE☆87Updated 2 years ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆104Updated last year
- A tool for plotting CAFE5 gene family expansion/contraction result☆29Updated last year
- FastOMA is a scalable software package to infer orthology relationship.☆76Updated this week
- Plastid Genome Annotator☆49Updated 4 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- NLR annotation tool☆27Updated last year
- ☆79Updated 10 months ago
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆83Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 8 months ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆62Updated 4 months ago
- Tiberius is a deep learning gene finder.☆61Updated this week
- Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes☆21Updated 3 years ago