kwongj / fa-rename
Renames headers in FASTA file
☆12Updated 7 years ago
Alternatives and similar repositories for fa-rename:
Users that are interested in fa-rename are comparing it to the libraries listed below
- Automatic evaluation of HGTs☆26Updated last month
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated 4 months ago
- Chromosome-level synteny plotting using orthologous regions☆28Updated 4 months ago
- Genome alignment and synteny plots☆27Updated last year
- R package to draw syntenic plots in 3 different styles☆39Updated last year
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated 7 months ago
- ☆21Updated 5 months ago
- A simple program for evaluate the assembly of a give genome.☆18Updated last year
- Calculate circos format data of GC content and GC skew from genome data.☆11Updated 9 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- General purpose population genetics software☆12Updated 5 years ago
- Dinoflagellate Annotation Workflow☆13Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆26Updated 6 months ago
- ☆32Updated 4 years ago
- pGWAS and functional filtering pipeline to identify candidate adaptive genetic traits in bacteria☆11Updated 6 years ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆16Updated 4 years ago
- Domain based annotation of transposable elements☆19Updated this week
- ☆28Updated 8 months ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 4 years ago
- ContScout sequence contamination filter tool☆19Updated 2 weeks ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 6 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 9 months ago
- Diploid genome assembly analysis tools☆14Updated 4 months ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆15Updated 2 years ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆14Updated 3 years ago
- Gene model transfer from closely related reference genomes using cDNA alignments☆10Updated 4 years ago
- ☆19Updated 2 years ago
- MCMCtree tutorials☆18Updated 8 months ago