Alternatives and similar repositories for ASCPsra

Users that are interested in ASCPsra are comparing it to the libraries listed below

• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆30Updated last year
• YuLab-SMU / MicrobiomeProfiler
  A shiny package for microbiome functional enrichment analysis
  ☆37Updated 3 weeks ago
• xia-lab / Seq2Fun
  ☆16Updated last year
• XiDsLab / TAGET
  ☆18Updated 2 years ago
• AGIScuipeng / PMPrimer
  Automatically design multiplex PCR primer pairs for diverse templates
  ☆26Updated 11 months ago
• EnvGen / DEGEPRIME
  A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies
  ☆30Updated last year
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆25Updated 2 months ago
• ShawnWx2019 / MetMiner
  MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis
  ☆16Updated 6 months ago
• gao-lab / CPC2_standalone
  Official repo for the standalone package of Coding Potential Calculator (CPC) 2.
  ☆24Updated 3 years ago
• almeidasilvaf / syntenet
  An R package to infer and analyze synteny networks from protein sequences
  ☆30Updated 4 months ago
• cfarkas / annotate_my_genomes
  A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes
  ☆29Updated last year
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆32Updated 2 years ago
• zhejilab / RibORF
  Identifying genome-wide translated open reading frames using ribosome profiling
  ☆23Updated last year
• ablab / rnaquast
  Quality assessment of de novo transcriptome assemblies from RNA-Seq data
  ☆21Updated 6 months ago
• ndu-bioinfo / Dap-Seq-pipeline
  TF-DNA-binding assay analysis pipeline
  ☆12Updated 4 years ago
• christopher-vollmers / Mandalorion
  Pipeline to identify isoforms from full-length cDNA sequencing data
  ☆25Updated last week
• thackl / seq-scripts
  scripts for sequence and feature conversion, annotation, analysis ...
  ☆27Updated last month
• RitataLU / MethylC-analyzer
  ☆13Updated 2 years ago
• Linlab-slu / TSSr
  ☆11Updated last month
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• TimoLassmann / samstat
  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
  ☆24Updated last year
• jameslz / fastx-utils
  fastx-utils using klib
  ☆18Updated 4 years ago
• djhn75 / RNAEditor
  ☆15Updated 2 years ago
• huangwenze / lncHOME_analysis
  lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…
  ☆13Updated last year
• srbehera / DRAGEN_Analysis
  ☆31Updated 11 months ago
• biocorecrg / ExOrthist
  ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.
  ☆23Updated 5 months ago
• RacconC / gtftools
  ☆13Updated 2 years ago
• AngelCampos / txtools
  An R package to process and analyze transcriptomic data
  ☆17Updated 8 months ago
• aakechin / cutPrimers
  curPrimers is a tool for trimming primer sequences from amplicon based NGS reads
  ☆16Updated 5 years ago
• deweylab / detonate
  DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation
  ☆13Updated 8 years ago