wangshun1121 / ASCPsra
将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。
☆10Updated 4 years ago
Related projects: ⓘ
- An R package to infer and analyze synteny networks from protein sequences☆21Updated 5 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆28Updated 5 months ago
- A pipeline to identify gene family using mutiple tools and scripts.☆11Updated 3 years ago
- TF-DNA-binding assay analysis pipeline☆11Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆19Updated last year
- microRNA PREdiction From small RNA-seq data☆29Updated 6 years ago
- A shiny package for microbiome functional enrichment analysis☆36Updated last month
- ☆15Updated 5 months ago
- Simple library/pipeline to generate and handle Hi-C data.☆36Updated 3 months ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆23Updated 4 months ago
- Yet another Hi-C scaffolding tool☆19Updated last year
- This is the supplementary code for CRC-multi-kingdom☆16Updated 2 years ago
- ☆21Updated 4 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆21Updated last year
- lncRNA-screen☆26Updated 7 years ago
- Comprehensive and scalable differential splicing analyses☆13Updated 3 months ago
- ☆22Updated last year
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆13Updated 2 years ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆19Updated last year
- Workflows for metagenomic sequence data processing and analysis.☆17Updated 5 years ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆30Updated 5 years ago
- ☆10Updated 3 years ago
- A pipeline for isoseq☆23Updated 6 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆25Updated 5 months ago
- Official repo for the standalone package of Coding Potential Calculator (CPC) 2.☆23Updated 3 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆23Updated last year
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆15Updated last year
- ☆21Updated 5 years ago
- HoCoRT - Remove specific organisms from sequencing reads☆14Updated 11 months ago
- ☆16Updated 8 months ago