Alternatives and similar repositories for Cacao_Genomics

Users that are interested in Cacao_Genomics are comparing it to the libraries listed below

• yexinhai / genomics-analysis-pipeline
  Some useful bioinformatics pipelines for genomics analysis
  ☆14Updated 4 years ago
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• Minglc / CisTrans-ECAS
  ☆10Updated last year
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆20Updated 6 years ago
• xuechantian / Plant-LncRNA-pipline
  ☆14Updated 5 months ago
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• caasivfbioinfo / Bol_pangenome
  ☆15Updated last year
• evotools / CattleGraphGenomePaper
  Set of script for the paper on the cattle graph genome
  ☆13Updated 2 years ago
• BovReg / BovReg_eQTL
  Repository
  ☆10Updated 10 months ago
• galikbence / genome_annotation
  Pipeline for eukaryotic genome annotation based on external evidences
  ☆13Updated 2 years ago
• maiziezhoulab / LRSV_combo
  Long Read Based SV Calling Tools Analysis
  ☆14Updated last year
• ben-laufer / Tag-seq
  3’ Tag RNA-seq pipeline (Work in progress)
  ☆10Updated 4 years ago
• comery / gVisualization
  issues for semina "Data Visulization"
  ☆13Updated 2 months ago
• YinYuan-001 / muntjac_code
  ☆10Updated 3 years ago
• gf777 / mitoVGP
  The Vertebrate Genomes Project Mitogenome Assembly Pipeline
  ☆19Updated 2 years ago
• Rowena-h / FusariumLifestyles
  Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣
  ☆11Updated 2 years ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆24Updated last week
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago
• njdbickhart / GoatAssemblyScripts
  A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly
  ☆11Updated 8 years ago
• IBEXCluster / HPC-GVCW
  Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.
  ☆13Updated last year
• Chenghong412 / sheep_introgression
  ☆11Updated 2 years ago
• glogsdon1 / sunk-based_assembly
  ☆15Updated 4 years ago
• songtaogui / pan-Zea_utilities
  the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics
  ☆17Updated 3 years ago
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆14Updated 5 years ago
• Uauy-Lab / pangenome-haplotypes
  Scripts to do haplotype analysis on pan genomes.
  ☆21Updated 4 years ago
• Yafei-Guo-coder / DumpNice
  Codes for Vmap1.1 and Vmap3
  ☆11Updated 8 months ago
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆17Updated 2 months ago
• LAILAB-CAU / update-Mo17
  ☆27Updated 2 years ago
• xinkaitong / 1k-pig-genomes
  Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences
  ☆13Updated 2 years ago
• MorrellLAB / File_Conversions
  Scripts to convert between file formats for various analyses
  ☆17Updated 3 months ago