BenoitMorel / AsteroidLinks
☆16Updated last year
Alternatives and similar repositories for Asteroid
Users that are interested in Asteroid are comparing it to the libraries listed below
Sorting:
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆16Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Updated 11 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Updated 4 years ago
- ☆22Updated 11 years ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 8 months ago
- Genome alignment and synteny plots☆33Updated 2 years ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated last year
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆27Updated 4 months ago
- Code for computing various support scores for internodes☆19Updated 5 years ago
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆19Updated this week
- Chromosome-level synteny plotting using orthologous regions☆31Updated last year
- spruceup☆25Updated 5 months ago
- Tool for fully-automated inference of species trees from raw genome assemblies☆43Updated 2 months ago
- Automatic evaluation of HGTs☆30Updated 11 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆19Updated 5 years ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Updated 3 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆37Updated this week
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- ☆26Updated 4 years ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated last year
- Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.☆13Updated 3 years ago
- ☆21Updated 3 weeks ago
- Toolkit for evolutionary analyses of linkage groups☆33Updated last year
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Updated last year
- Multi-genome synteny block visualization tool☆52Updated last week
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆20Updated 3 months ago
- A Swiss-Army-Knife for Bioinformaticians☆14Updated 2 weeks ago