☆16Feb 20, 2024Updated 2 years ago
Alternatives and similar repositories for Asteroid
Users that are interested in Asteroid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Decomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve o…☆11Jun 19, 2025Updated 9 months ago
- Fast, accurate species tree estimation.☆12Aug 29, 2024Updated last year
- Code for computing various support scores for internodes☆19Apr 7, 2020Updated 5 years ago
- Gene tree - species tree reconciliation from gene tree distributions☆39Mar 13, 2026Updated last week
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆11Jan 20, 2026Updated 2 months ago
- Quartet-based species tree and tree of blob estimation☆15Feb 10, 2026Updated last month
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆229Jan 4, 2026Updated 2 months ago
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated last year
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated last year
- A tool to infer species tree and phylogenetic network from multilocus data☆32Jul 2, 2020Updated 5 years ago
- ☆78Jun 2, 2025Updated 9 months ago
- SimPhy: A comprehensive simulator of gene family evolution☆34Jun 30, 2023Updated 2 years ago
- A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf s…☆23Aug 19, 2021Updated 4 years ago
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆15Feb 24, 2025Updated last year
- ☆17Oct 21, 2024Updated last year
- Dynamic CPU/GPU power scaling to maximize renewable energy usage and reduce emissions☆17Apr 11, 2025Updated 11 months ago
- A Swiss-Army-Knife for Bioinformaticians☆14Mar 3, 2026Updated 2 weeks ago
- Manipulate and generate figures for trees in Newick format☆22Jul 31, 2025Updated 7 months ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆16May 27, 2024Updated last year
- spruceup☆25Aug 15, 2025Updated 7 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Jun 1, 2022Updated 3 years ago
- The MitoGeneExtractor can be used to extract protein coding mitochondrial genes, such as COI and others from short and long read sequenci…☆10Sep 24, 2025Updated 5 months ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆51Mar 4, 2024Updated 2 years ago
- Testing hybridization using species trees☆10Aug 25, 2017Updated 8 years ago
- Codon-Aware Multiple Sequence Alignments☆20Nov 15, 2024Updated last year
- Drawing reconciled phylogenetic trees allowing 1, 2 or 3 reconcillation levels☆23Oct 24, 2025Updated 4 months ago
- Quantifying Introgression via Branch Lengths☆56Sep 30, 2022Updated 3 years ago
- ASTRAL for PaRalogs and Orthologs☆22Sep 13, 2022Updated 3 years ago
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆80Updated this week
- Clann: constructing consensus trees and supertrees from multiple source trees☆18Mar 16, 2026Updated last week
- Automatic evaluation of HGTs☆30Jan 31, 2025Updated last year
- Lightweight python library for predicting the difficulty of alignments in phylogenetics☆21Dec 6, 2025Updated 3 months ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 2 weeks ago
- Sorting and subsampling phylogenomic datasets☆30Apr 9, 2025Updated 11 months ago
- A Julia package for estimating phylogenetic networks from genomic data☆20Jun 3, 2024Updated last year
- Phylogenetic tools for Eco-phylogenetics☆14Oct 10, 2024Updated last year
- Detection of outlier genes and species in phylogenomics☆18Dec 14, 2025Updated 3 months ago
- STRIDE: Species Tree Root Inference from Gene Duplication Events☆11Aug 28, 2018Updated 7 years ago