BorchLab / IbexLinks
Using BCR and expression for sequence embedding
☆25Updated last month
Alternatives and similar repositories for Ibex
Users that are interested in Ibex are comparing it to the libraries listed below
Sorting:
- ☆44Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆57Updated last year
- ☆26Updated 8 months ago
- ☆37Updated 2 weeks ago
- Signac☆26Updated 2 years ago
- ☆29Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆97Updated 8 months ago
- Inference of TCR motifs☆32Updated 7 months ago
- ☆36Updated 11 months ago
- Using TCR and expression for sequence embedding☆62Updated last month
- Easy and comprehensive biological network reconstruction and analysis☆35Updated 4 months ago
- epigenome analysis to rank transcription factors☆33Updated 3 years ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆44Updated last month
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Updated 6 years ago
- ☆39Updated 4 years ago
- ☆61Updated 4 years ago
- scWGCNA☆61Updated 3 years ago
- Benchmark of GRNs using the GRETA pipeline☆31Updated last week
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- Materials and scripts for building cell type encyclopedia table☆20Updated 2 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 3 years ago
- ACTIONet single-cell analysis framework☆44Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last week
- Fast motif matching in R☆46Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 11 months ago