statbiophys / soNNiaLinks
☆16Updated last month
Alternatives and similar repositories for soNNia
Users that are interested in soNNia are comparing it to the libraries listed below
Sorting:
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 5 months ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆24Updated last year
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- Predictor of TCR-epitope interactions☆34Updated 3 months ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆54Updated 6 years ago
- ☆38Updated 2 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆61Updated last month
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated last week
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Updated 2 years ago
- Comparing performance across many methodological dimensions among tools that predict RNA after TF knockdowns and overexpression.☆21Updated 3 months ago
- Absolve antibody variable domain sequence analysis☆18Updated 7 years ago
- Collection of papers related to BCR repertoire analyses☆18Updated 3 years ago
- Comprehensive Python client for the Uniprot REST API☆54Updated 2 months ago
- ☆81Updated 2 years ago
- Decoding the functional networks of non-model organisms☆11Updated 2 weeks ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Updated 8 months ago
- Compute generation probabilities of CDR3 amino acid and nucleotide sequences☆62Updated last month
- ☆31Updated 5 months ago
- surrogate quantitative interpretability for deepnets☆24Updated 4 months ago
- Functional Embedding of Gene Signatures☆48Updated last year
- ☆42Updated 4 months ago
- HLA-I ligand predictor☆43Updated 2 months ago
- Dataloader for applying sequence models to personalized genomics☆27Updated last week
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated last week
- RiboNN: predicting translation efficiencies from mRNA sequences☆44Updated 2 months ago
- PRedictor of IMmunogenic Epitopes☆25Updated 2 months ago
- ☆44Updated 3 months ago