constantAmateur / cellSignalAnalysisLinks
Identify major cellular signals in bulk transcriptomes
☆11Updated 3 years ago
Alternatives and similar repositories for cellSignalAnalysis
Users that are interested in cellSignalAnalysis are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated this week
- ☆35Updated 2 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- ☆32Updated 4 months ago
- ☆29Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 7 months ago
- .h5mu files interface for Seurat☆30Updated last year
- ☆18Updated last month
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆51Updated this week
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- ☆41Updated 4 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 7 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 2 months ago
- cell type specific, trait-associated gene regulation☆26Updated 2 months ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 2 months ago
- Single-cell Mutual Information-based Network Engineering Ranger☆17Updated this week
- ☆30Updated 2 years ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆25Updated 2 years ago
- ☆49Updated 10 months ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- Information-based dimensionality reduction☆29Updated 5 months ago
- ☆38Updated 8 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆21Updated 2 weeks ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 6 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 11 months ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆31Updated 3 months ago