tuonglab / dandelionRLinks
Single-cell immune repertoire trajectory analysis in R
☆11Updated 2 weeks ago
Alternatives and similar repositories for dandelionR
Users that are interested in dandelionR are comparing it to the libraries listed below
Sorting:
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated last year
- ☆32Updated 6 months ago
- ☆29Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- Single-cell Case Control Analysis☆51Updated 8 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Network construction Algorithm☆22Updated 10 months ago
- ☆20Updated last year
- Single-cell Mutual Information-based Network Engineering Ranger☆19Updated last month
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- scWGCNA☆61Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- ☆37Updated last year
- ☆49Updated last year
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated 2 weeks ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆16Updated 3 months ago
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 6 years ago
- ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration…☆22Updated 3 weeks ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- R package for analysing single cell data☆56Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆41Updated 3 years ago
- ☆39Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Updated 2 years ago
- ☆41Updated 4 years ago