tuonglab / dandelionRLinks
Single-cell immune repertoire trajectory analysis in R
☆11Updated 5 months ago
Alternatives and similar repositories for dandelionR
Users that are interested in dandelionR are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- Network construction Algorithm☆22Updated last year
- ANS_signature_scoring: A gene expression signature scoring Python package.☆16Updated 2 weeks ago
- ☆33Updated last year
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆45Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- R package for Flexible dot plots☆29Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated last week
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 6 years ago
- ☆53Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Single-cell Mutual Information-based Network Engineering Ranger☆22Updated 5 months ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- ☆39Updated 5 months ago
- scover☆24Updated 2 years ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Paired Insertion Counting for snATAC-seq data☆19Updated 8 months ago
- ☆43Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Updated 3 years ago
- scWGCNA☆61Updated 3 years ago
- R package for analysing single cell data☆59Updated 3 years ago
- ☆20Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆97Updated 8 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago