Mapping the Functional Landscape of TCR Repertoire
☆36Oct 8, 2021Updated 5 years ago
Alternatives and similar repositories for TESSA
Users that are interested in TESSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Clonotype Neighbor Graph Analysis☆100Jun 15, 2026Updated 3 months ago
- Using TCR and expression for sequence embedding☆64Jan 6, 2026Updated 9 months ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆18Jun 28, 2025Updated last year
- Decombinator: fast, error-correcting analysis of TCR repertoires☆28May 18, 2026Updated 4 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆22Jan 15, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆128Updated this week
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆77Dec 9, 2021Updated 4 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated last year
- R package for the analysis of single-cell immune repertoires☆45Feb 7, 2025Updated last year
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆36Apr 1, 2022Updated 4 years ago
- ☆19Apr 20, 2025Updated last year
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated last year
- A toolkit for single-cell immune profiling☆377Sep 25, 2026Updated 2 weeks ago
- Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy☆15Sep 17, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆243Feb 12, 2026Updated 7 months ago
- Using BCR and expression for sequence embedding☆28Jun 12, 2026Updated 3 months ago
- A scanpy extension to analyse single-cell TCR and BCR data.☆266Updated this week
- ☆41Aug 18, 2020Updated 6 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- TCR and BCR assembly from RNA-seq data☆365Sep 25, 2026Updated 2 weeks ago
- HLA-II ligand predictor.☆52Aug 25, 2026Updated last month
- ☆23Sep 20, 2022Updated 4 years ago
- Versatile FASTA/FASTQ demultiplexer.☆34Jun 10, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- flexible CDR based distance metrics☆75Dec 16, 2025Updated 9 months ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆123Sep 16, 2025Updated last year
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆117Dec 18, 2025Updated 9 months ago
- ☆11Jul 9, 2024Updated 2 years ago
- Interpretation of cell states using reference single-cell maps☆327Dec 19, 2025Updated 9 months ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆93Jun 14, 2022Updated 4 years ago
- 🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design☆341Aug 18, 2026Updated last month
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆16Apr 26, 2022Updated 4 years ago
- T/B cell receptor sequencing analysis notes☆285Dec 1, 2024Updated last year
- Pipeline for harmonising immunological receptor–epitope interactions☆17Sep 28, 2026Updated last week
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Oct 28, 2019Updated 6 years ago
- Quantifying experimental perturbations at single cell resolution☆118Sep 27, 2024Updated 2 years ago
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Jan 31, 2023Updated 3 years ago