Mapping the Functional Landscape of TCR Repertoire
☆36Oct 8, 2021Updated 4 years ago
Alternatives and similar repositories for TESSA
Users that are interested in TESSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Clonotype Neighbor Graph Analysis☆95Feb 12, 2026Updated 2 months ago
- Using TCR and expression for sequence embedding☆63Jan 6, 2026Updated 3 months ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆16Jun 28, 2025Updated 9 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Jan 15, 2023Updated 3 years ago
- Decombinator v5: fast, error-correcting analysis of TCR repertoires☆27Mar 20, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆125Mar 16, 2026Updated 3 weeks ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated 11 months ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆74Dec 9, 2021Updated 4 years ago
- R package for the analysis of single-cell immune repertoires☆45Feb 7, 2025Updated last year
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Apr 1, 2022Updated 4 years ago
- ☆18Apr 20, 2025Updated 11 months ago
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated 8 months ago
- A toolkit for single-cell immune profiling☆366Apr 3, 2026Updated last week
- Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy☆14Sep 17, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆238Feb 12, 2026Updated 2 months ago
- Using BCR and expression for sequence embedding☆26Apr 3, 2026Updated last week
- A scanpy extension to analyse single-cell TCR and BCR data.☆246Updated this week
- TCR and BCR assembly from RNA-seq data☆346Mar 14, 2026Updated 3 weeks ago
- ☆41Aug 18, 2020Updated 5 years ago
- HLA-II ligand predictor.☆45Apr 6, 2023Updated 3 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- ☆22Sep 20, 2022Updated 3 years ago
- Versatile FASTA/FASTQ demultiplexer.☆33May 29, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- flexible CDR based distance metrics☆71Dec 16, 2025Updated 3 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆106Dec 18, 2025Updated 3 months ago
- ☆10Jul 9, 2024Updated last year
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆122Sep 16, 2025Updated 6 months ago
- Interpretation of cell states using reference single-cell maps☆315Dec 19, 2025Updated 3 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆90Jun 14, 2022Updated 3 years ago
- 🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design☆338Nov 18, 2025Updated 4 months ago
- ☆15Apr 26, 2022Updated 3 years ago
- T/B cell receptor sequencing analysis notes☆275Dec 1, 2024Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Oct 28, 2019Updated 6 years ago
- Quantifying experimental perturbations at single cell resolution☆114Sep 27, 2024Updated last year
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 4 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Oct 6, 2021Updated 4 years ago
- Cross-modal Identification of Tertiary Lymphoid Structures☆27Jun 19, 2024Updated last year
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Jan 31, 2023Updated 3 years ago
- Spatial Cellular Estimator for Tumors☆62Mar 23, 2026Updated 2 weeks ago