Alternatives and similar repositories for IgDetective:

Users that are interested in IgDetective are comparing it to the libraries listed below

• TrinityCTAT / CTAT-VirusIntegrationFinder
  ☆15Updated last year
• pachterlab / qcbc
  ☆19Updated 4 months ago
• Acribbs / TallyNN
  single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
  ☆13Updated last year
• complextissue / pytximport
  Feature-rich Python implementation of the tximport package for gene count estimation.
  ☆35Updated 2 weeks ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆26Updated 2 months ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆32Updated 2 weeks ago
• McGranahanLab / mhc-hammer
  Pipeline to detect HLA disruption from WES and RNAseq data
  ☆16Updated last month
• matsengrp / phippery
  ☆16Updated 5 months ago
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆18Updated last month
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 2 years ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆26Updated 11 months ago
• NCBI-Hackathons / HLAClustRView
  R package specialized in HLA typing clustering and visualization based on specific similarity metrics
  ☆12Updated 5 years ago
• parklab / SCAN2
  SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
  ☆12Updated 8 months ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 3 years ago
• gerstung-lab / deepSNV
  The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.
  ☆14Updated 2 years ago
• gexijin / shinygo
  ☆26Updated last month
• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆16Updated 3 weeks ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• sartorlab / methylSig
  R package for DNA methylation analysis
  ☆18Updated 7 months ago
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated 8 months ago
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆16Updated 5 months ago
• mehdiborji / nanoranger
  simplified cellranger for long-read data
  ☆18Updated this week
• djhn75 / RNAEditor
  ☆15Updated 2 years ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆19Updated last year
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 6 years ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆39Updated 2 years ago
• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• Genentech / Isosceles
  The Isoforms from Single-Cell; Long-read Expression Suite
  ☆26Updated 2 months ago
• jfjlaros / demultiplex
  Versatile FASTA/FASTQ demultiplexer.
  ☆33Updated 10 months ago
• vpc-ccg / calib
  Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.
  ☆38Updated last year