☆19Apr 20, 2025Updated last year
Alternatives and similar repositories for HLAGuessr
Users that are interested in HLAGuessr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆23Feb 1, 2024Updated 2 years ago
- Python library for immune repertoire analysis☆17Updated this week
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- TCR validated database☆50May 5, 2025Updated last year
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆27Mar 14, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Detecting TCR involved in immune responses from single RepSeq datasets☆28Jun 17, 2019Updated 7 years ago
- ☆25Dec 5, 2025Updated 7 months ago
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated 11 months ago
- ☆15Jul 16, 2026Updated last week
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Jan 31, 2023Updated 3 years ago
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆56Apr 3, 2024Updated 2 years ago
- ☆45Oct 30, 2024Updated last year
- Analyzing cellular niches in spatial transcriptomics data☆38Nov 18, 2024Updated last year
- A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping☆29Jul 21, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Single cell pipelines☆16Jun 14, 2026Updated last month
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆15May 29, 2026Updated 2 months ago
- Provides classes for working with sets☆11Dec 19, 2025Updated 7 months ago
- Mapping the Functional Landscape of TCR Repertoire☆36Oct 8, 2021Updated 4 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 8 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆30Jan 29, 2025Updated last year
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆115Dec 18, 2025Updated 7 months ago
- Interactive software tool for the assignment of cell types in single-cell studies.☆34Apr 14, 2023Updated 3 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Sep 12, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Sep 28, 2022Updated 3 years ago
- Using TCR and expression for sequence embedding☆63Jan 6, 2026Updated 6 months ago
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆69Mar 12, 2026Updated 4 months ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆21Jul 21, 2026Updated last week
- Large language modeling applied to T-cell receptor (TCR) sequences.☆61May 4, 2022Updated 4 years ago
- ☆22Jul 17, 2024Updated 2 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated last year
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Aug 10, 2021Updated 4 years ago
- Decombinator: fast, error-correcting analysis of TCR repertoires☆28May 18, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- marker-based purification of cell types from single-cell RNA-seq datasets☆145Mar 13, 2026Updated 4 months ago
- Easy Setup of a Reproducible Workflow☆37Sep 9, 2024Updated last year
- Terraform template to create AWS resources to execute jobs using nextflow☆22Mar 1, 2023Updated 3 years ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆13Mar 11, 2026Updated 4 months ago
- Highly informative TCR representation model☆16Nov 26, 2025Updated 8 months ago
- Command-line tool for building Gephi force-directed graph diagrams.☆10Nov 10, 2017Updated 8 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆34Feb 18, 2026Updated 5 months ago