An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis
☆14Apr 5, 2025Updated 11 months ago
Alternatives and similar repositories for MIST
Users that are interested in MIST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell immune repertoire trajectory analysis in R☆11Aug 8, 2025Updated 7 months ago
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆21Aug 28, 2025Updated 6 months ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated 11 months ago
- ☆22Sep 4, 2025Updated 6 months ago
- Using BCR and expression for sequence embedding☆26Dec 10, 2025Updated 3 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Single-cell Mutual Information-based Network Engineering Ranger☆23Aug 28, 2025Updated 6 months ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆41Nov 18, 2025Updated 4 months ago
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆21Feb 10, 2026Updated last month
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 5 months ago
- ☆16Apr 18, 2025Updated 11 months ago
- R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…☆28Oct 1, 2022Updated 3 years ago
- ☆11May 11, 2024Updated last year
- Inference of TCR motifs☆32Jun 17, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Resources for the BioML Challenge 2024: Bits to Binders☆19Aug 24, 2024Updated last year
- ☆56Nov 1, 2024Updated last year
- A simple collection of well working NLP models (Keras, H2O, StarSpace) tuned and benchmarked on a variety of datasets.☆18Mar 8, 2019Updated 7 years ago
- ☆14Oct 16, 2025Updated 5 months ago
- ☆10Nov 29, 2022Updated 3 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆49Updated this week
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆20Updated this week
- A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.☆22May 8, 2024Updated last year
- Tutorials in datamining and bioinformatics☆12Jan 18, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- RA Synovial Single-cell Multimodal Cell Atlas☆20Mar 6, 2024Updated 2 years ago
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆24May 13, 2025Updated 10 months ago
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 11 months ago
- ☆18Apr 20, 2025Updated 11 months ago
- 绯浅yousa_blog_backup☆12Nov 21, 2019Updated 6 years ago
- Differentiable Pairing using Alignment-based Language Models☆24Jan 5, 2024Updated 2 years ago
- 通过微信公众号在全球范围内实时远程控制任何电脑☆17Mar 6, 2019Updated 7 years ago
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Jun 19, 2025Updated 9 months ago
- ☆10Mar 23, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy☆14Sep 17, 2022Updated 3 years ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆29Aug 20, 2024Updated last year
- Registries for biological ontologies.☆25Mar 18, 2026Updated last week
- This repository implements the winning solution for the single cell perturbation problems☆16Dec 22, 2023Updated 2 years ago
- Publically accessible code for DIISCO method☆12Oct 15, 2025Updated 5 months ago