BoevaLab / ANS_signature_scoringLinks
ANS_signature_scoring: A gene expression signature scoring Python package.
☆16Updated 3 months ago
Alternatives and similar repositories for ANS_signature_scoring
Users that are interested in ANS_signature_scoring are comparing it to the libraries listed below
Sorting:
- Gene Expression Decomposition and Integration☆19Updated 10 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Single-cell immune repertoire trajectory analysis in R☆11Updated 4 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- ☆25Updated 3 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- ☆16Updated 2 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆37Updated last month
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- ☆12Updated 4 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- scover☆24Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration…☆25Updated 5 months ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- Collection of useful methods for single cell analysis☆15Updated last year
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- Single-cell Case Control Analysis☆52Updated last week
- ☆29Updated 2 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 4 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 9 months ago
- ☆18Updated 2 years ago